| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3361 |
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| Symbol | |
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| ID | 6283960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3779216 |
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| End bp | 3779956 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642622935 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001896976 |
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| Protein GI | 187925334 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0235046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000227279 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCATATC ACTGGAACTG GGGCATTCTG CTGAGTCCCG TCTCCACCGG CGAGCCGACC
ACCTATCTGG GCTGGCTGCT GTCGGGCTTC TGGGTGACGA TTACCGTGTC GCTGTCGGCG
TGGGTGATCG CGCTGATCGT CGGTTCGTTG TTCGGTGTGC TGCGCACGGT GCCGAATAAA
TGGGCGTCGG GCATCGGCAC GCTGTATGTG GCGATTTTCC GTAATATCCC GCTGATCGTG
CAGTTCTTCA TCTGGTATCT GGTGATACCG GAGTTGCTGC CCGCTTCGAT GGGCAACTGG
TTCAAGCAAC TGCCGCCCGG CGCGCAGTTT TTCTCGTCGT CGATCATCTG TCTCGGGCTT
TTCACGGCTG CGCGCGTATG CGAGCAGGTG CGCTCGGGTA TCAACGCGCT GCCGAAAGGT
CAGCGCGCCG CGGGCCTGGC CATGGGCTTC ACGCAATGGC AGACGTACCG CTATGTGCTG
CTGCCGGTCG CCTACCGGAT CATCGTGCCG CCGCTGACTT CCGAGTTTCT GAATATCTTC
AAGAACTCGG CGGTGGCGTC CACGATCGGC CTGCTCGATC TGTCCGCTCA GGCGCGCCAA
CTGGTCGACT ACACGTCGCA GACGTATGAG TCGTTCATCG CGGTCACGAT CGCGTACATG
CTGATCAATC TGGTCGTGAT GCAACTCATG CGCTGGGTCG AAGCCAAGAC CCGGTTGCCC
GGCTATATCG GAGGCAAGTA A
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| Protein sequence | MSYHWNWGIL LSPVSTGEPT TYLGWLLSGF WVTITVSLSA WVIALIVGSL FGVLRTVPNK
WASGIGTLYV AIFRNIPLIV QFFIWYLVIP ELLPASMGNW FKQLPPGAQF FSSSIICLGL
FTAARVCEQV RSGINALPKG QRAAGLAMGF TQWQTYRYVL LPVAYRIIVP PLTSEFLNIF
KNSAVASTIG LLDLSAQARQ LVDYTSQTYE SFIAVTIAYM LINLVVMQLM RWVEAKTRLP
GYIGGK
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