| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3359 |
|---|
| Symbol | |
|---|
| ID | 6283958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3777817 |
|---|
| End bp | 3778542 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642622933 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001896974 |
|---|
| Protein GI | 187925332 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00170504 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00000222316 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCTA TCAAGAATGT TTCGAAGTGG TACGGCCAGT TTCAAGTGCT GACCGACTGC
ACGACGGAAG TCAAAAAGGG TGAAGTGGTG GTGGTGTGCG GGCCGTCGGG CTCGGGCAAG
TCCACGCTGA TCAAAACCGT CAACGGCCTC GAGCCGTTCC AGAAGGGCGA GATCGTCATC
AACGGGCAGT CGCTCACCGA CAAGAAAACC AATCTGTCGA AACTGCGGGC CAAGGTTGGC
ATGGTGTTCC AGCACTTCGA GCTGTTCCCG CATCTGTCGA TCGTCCAGAA CCTCACGCTC
GCGCAGGTGA AGGTGCTCGG CCGCTCGAAC GACGAAGCTA CGGCGAAGGG GTTGAAACTG
CTCGATCGCG TCGGCCTGCG TGCGCACGCG GACAAGTTTC CGGGCCAATT GTCGGGTGGT
CAGCAACAGC GCGTGGCGAT TGCGCGCGCG TTGTCGATGG ATCCGATCGC CATGCTGTTC
GACGAGCCGA CTTCGGCGCT CGATCCGGAA ATGATCAACG AAGTGCTCGA CGTGATGGTC
GAACTCGCGC AGGAAGGCAT GACCATGATG TGCGTGACGC ACGAAATGGG CTTTGCGAAG
AAGGTCGCGC ACCGCGTGAT CTTCATGGAC AAGGGCTTGA TCGTGGAAGA CGACCGCAAG
GAAGACTTCT TCGCGAATCC GAAGTCGGAT CGCGCGAAGG ACTTTCTGGC GAAGATTCTG
CACTGA
|
|---|
| Protein sequence | MISIKNVSKW YGQFQVLTDC TTEVKKGEVV VVCGPSGSGK STLIKTVNGL EPFQKGEIVI
NGQSLTDKKT NLSKLRAKVG MVFQHFELFP HLSIVQNLTL AQVKVLGRSN DEATAKGLKL
LDRVGLRAHA DKFPGQLSGG QQQRVAIARA LSMDPIAMLF DEPTSALDPE MINEVLDVMV
ELAQEGMTMM CVTHEMGFAK KVAHRVIFMD KGLIVEDDRK EDFFANPKSD RAKDFLAKIL
H
|
|---|
| |