| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3354 |
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| Symbol | rplM |
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| ID | 6282125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3772573 |
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| End bp | 3773001 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642622928 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_001896969 |
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| Protein GI | 187925327 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000156516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000450928 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGACGT TTTCCGCAAA AGCCCATGAG GTTACGCGTG AATGGTACGT GATTGACGCG
ACGGATAAGG TTCTCGGGCG TGTCGCCAGC GAAGTGGCAC ACCGTCTTCG CGGCAAGCAC
AAGCCTGAAT TCACTCCGCA CGTCGACACC GGTGATTTCA TCATCGTTAT CAACGCGGGT
AAGTTGCGCG TCACGGGCAA CAAGGCTACT GACAAGAAGT ACTACCGTCA CTCGGGCTAC
CCGGGCGGTA TCTATGAAAC GACGTTCGGC AAGATGCAAG AACGCTTCCC GGGCCGTGCG
CTCGAGAAAG CGGTCAAGGG CATGCTGCCG AAGGGCCCGC TCGGCTACGC GATGATCAAG
AAGCTGAAGG TCTACGCTGA AGCAACGCAT CCGCATTCGG CACAACAGCC GAAAGCGCTC
GAGATCTAA
|
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| Protein sequence | MKTFSAKAHE VTREWYVIDA TDKVLGRVAS EVAHRLRGKH KPEFTPHVDT GDFIIVINAG
KLRVTGNKAT DKKYYRHSGY PGGIYETTFG KMQERFPGRA LEKAVKGMLP KGPLGYAMIK
KLKVYAEATH PHSAQQPKAL EI
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