| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3334 |
|---|
| Symbol | lnt |
|---|
| ID | 6280989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3752834 |
|---|
| End bp | 3754582 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642622908 |
|---|
| Product | apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_001896949 |
|---|
| Protein GI | 187925307 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.499479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.16189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACC CGATAACTTC CCGTTCGCGC CGCGGCGTGA GCGCTTCTGC CGCCCAGCAA
ACGCGCGGTC GCACGCTGCC GCGCTGGCAT TACCTCGTCG CGCTGGCGGC GGGCGCGGCC
AATACGCTCT CGTTCGCGCC GACGCCGCAC GGCGGCTGGC TCGAACTCGC GATCTTCGCG
TTCTTCTTCG CGTGGCTCAC ACGCAGCACC GGCTGGAAAA GCGCGGCGCT GACGGGCGGC
GCGTTCGGCT TCGGTAATTT CGTGACCGGC GTGTGGTGGC TCTACGTCAG CATGCATTTC
TACGGCGGCA TGGCGGCGCC GCTCGCCGGC GCCGCCGTCG TGCTGTTCTC GCTGTATCTG
GCGATTTATC CCGCGCTGGC AGCCGGCGTC TGGTCGTTCT GCGCGGGTCA CGCGCGCAAC
GGCGCGGCCA TGGACGACGA CACGCCGTTC TCGCCGACCT GGCACGGCGC GCTGGCGTTC
GCAAGCGCGT GGGCGATCGG CGAATGGTTG CGCGGCACCG TGTTCACAGG CTTTCCGTGG
CTGGCGAGCG GTTACGCGCA AGTGGACGGT CCGTTCGCCG GCTTTGCGCC GGTGGCGGGC
GTGTACGGCG TCGGCTGGAT GCTGGCGCTG GTGGCCGCGC TGATCGTGCA GGCGGTGCTG
GCGCTGCTCT CTTCGCGCAA AGCGGCCCGT AATGGCGGCG TCGACCTCAG CAACAGCGGC
AAGAGCGCCA GAAACGGCAG CGACCGCAAC ACCGCCACGA AACCCGGCTT GGCGCGGGTA
GCCGTGCCGG CCATCATCGC GTTGGCGCTG ATCGCCGCCG GCCTGCTGCT GCCGCTCGTG
CAATGGACCG TGCCGGCCAA CGCGCCGCTG ACCGTGCGTC TGCTGCAAGG CAATGTCAAA
CAGGAAATGA AGTTCGAGGA ATCCGGCATG CGCGCCGCGA TCGATCAGTT TCAGCAGATG
ATCACCTCGA AGCCGGCCGA TCTGATCGTC ACGCCAGAAA CCGCCATCCC CGTGCTCGCG
CAGCAATTGC CGGCGCCGTT CGCCTCGGCG GTGCGCAACT TCTCGGACTC GACCGGCAGC
GCGATCCTGT TCGGCGCGAT CGGCGGCACG ATCACGCCTG AGGGCCAGGT GATCGACTAT
ACGAACAGCC TGTTCGGTGT CACGCCCGGC ACACGCGACG TGTATCGCTA CGACAAGCAT
CACCTCGTGC CGTTCGGCGA ATTCGTGCCG TGGGGCTTCC GCTGGTTCGT CAATCTGATG
AGCATTCCGC TCGGCGATTT CTTCCGTGGC GCGCCGGTGC AGAAGCCATT CATGGTGCAC
AACCAGCCGG TCGCCGTCGA CATCTGCTAC GAAGACATCT TCGGCGAAGA GATCGCGCGG
ACCATCCGCG AAAGCGCAAC ACCCGCCGGC GTGCTGGTCA ACTCGACCAA TCTCGCGTGG
TTCGGCGACA CGATCGCACT CGACCAGCAT TTGCAGATCG CGCGCATGCG CTCGCTGGAA
ACCGGCCGCC CGATGCTGCG CGCGACCAAC ACCGGCATGA CCGCCGCGAT CGACGCACAT
GGCAAGGTGA TCGGGCGCCT GACGCCGTAC ACGATCGGCT CGCTCGATGT CACCGTGCAA
GGCACTACGG GCAACACGCC TTACATCACG AGCGGCAATA ACACCGTGCT GGCGGTTTCG
TTACTGCTGC TGGCATTCGG CTTTGCGTTC GGACCGGGCA TTACGCGGCG CCGCAACGGC
AAACAATAA
|
|---|
| Protein sequence | MADPITSRSR RGVSASAAQQ TRGRTLPRWH YLVALAAGAA NTLSFAPTPH GGWLELAIFA
FFFAWLTRST GWKSAALTGG AFGFGNFVTG VWWLYVSMHF YGGMAAPLAG AAVVLFSLYL
AIYPALAAGV WSFCAGHARN GAAMDDDTPF SPTWHGALAF ASAWAIGEWL RGTVFTGFPW
LASGYAQVDG PFAGFAPVAG VYGVGWMLAL VAALIVQAVL ALLSSRKAAR NGGVDLSNSG
KSARNGSDRN TATKPGLARV AVPAIIALAL IAAGLLLPLV QWTVPANAPL TVRLLQGNVK
QEMKFEESGM RAAIDQFQQM ITSKPADLIV TPETAIPVLA QQLPAPFASA VRNFSDSTGS
AILFGAIGGT ITPEGQVIDY TNSLFGVTPG TRDVYRYDKH HLVPFGEFVP WGFRWFVNLM
SIPLGDFFRG APVQKPFMVH NQPVAVDICY EDIFGEEIAR TIRESATPAG VLVNSTNLAW
FGDTIALDQH LQIARMRSLE TGRPMLRATN TGMTAAIDAH GKVIGRLTPY TIGSLDVTVQ
GTTGNTPYIT SGNNTVLAVS LLLLAFGFAF GPGITRRRNG KQ
|
|---|
| |