Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3326 |
Symbol | |
ID | 6284242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3745052 |
End bp | 3746218 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642622900 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001896941 |
Protein GI | 187925299 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.139767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATTC CATTACTGGC GCTGGCGATC AGCGCATTCG CCATCGGCAC GACGGAGTTC GTGATCATGG GCTTGCTGCC CGAGGTGGCG CGCGATCTGG CGGTGTCGAT TCCGTCGGCG GGTTTGCTGG TGAGCGGGTA CGCGCTCGGC GTCGCCGTCG GCGCGCCGTT GCTCGCGGTG GTGACCAGCA AGATGCCGCG CAAGTTGGCG CTGCAACTGC TGATGGGCGT GTTCATCGTG GGCAATACGC TGTGCGCGGT CGCGTCCAGT TATTCCGTGC TGATGATCGC GCGCGTGGTG ACGTCGTTCG CGCATGGCTC GTTTTTCGGC ATTGGCGCGG TGGTGGCGGC TTCGCTCGTG CCGGCCGAAA AGCGCGCCAG CGCGATTGCG CTCATGTTCA CCGGCCTGAC GCTGGCGAAC GTGCTCGGCG TGCCGTTCGG CACGTTCGTC GGCCAGGAGT TCGGCTGGCG CGCGGCGTTC TGGATCGTCA GCGCGTTCGG CGTGCTGTCG CTCGCGGGCG TCACGGCGCT GGTGCCGAAT CGTCATGACG CAGGTCCGGT CGGACTCGGT CATGAAGTGC GCGTGTTGAA GGATCCGCAA GTCTGGACCG CGCTCGCCAT GACGGTGCTC GGCTTCGGCG GCGTGTTCGT CGTGTTCACC TACATAGCGC CAATTCTCGA GCAGGTGAGC GGCTTCTCGC CGCGCGGCGT CACGCTGATT CTGGTGCTGT TCGGCGTGGG CCTCACGATC GGCAATACGG TCGGCGGCAA GTTGGCGGAC CGTGCACTGA TGCCGTCGCT GATGGGCATT CTGGTTGCGC TCGCGGTGGT GATGGCGATC TTCGCGCGCA CCAGCCATTC GCAAGTGGCC GCGGCGATCA CGATCTTCGT GTGGGGCATT GCTGCGTTCG CCACGGTGCC GCCGTTGCAA ATGCGCGTAG TCGAGAAAGC GGCCGCGGCG CCGAATCTGG CTTCGACACT GAATATCGGT GCGTTCAACG TCGGCAATGC GGGCGGCGCG TGGCTTGGCG GTCTGGTGAT CAATCACGGC CATTCGCTCG ATACCTTGCC TTGGGTGGCG GCGGCGGTCA GCGTGGCGGC GTTGCTGCTG ACCTGGCTCG CGGCGCGTAT GGATGCGCCT GCGCCGACGG TGGCGCAGGG GGCGTAA
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Protein sequence | MPIPLLALAI SAFAIGTTEF VIMGLLPEVA RDLAVSIPSA GLLVSGYALG VAVGAPLLAV VTSKMPRKLA LQLLMGVFIV GNTLCAVASS YSVLMIARVV TSFAHGSFFG IGAVVAASLV PAEKRASAIA LMFTGLTLAN VLGVPFGTFV GQEFGWRAAF WIVSAFGVLS LAGVTALVPN RHDAGPVGLG HEVRVLKDPQ VWTALAMTVL GFGGVFVVFT YIAPILEQVS GFSPRGVTLI LVLFGVGLTI GNTVGGKLAD RALMPSLMGI LVALAVVMAI FARTSHSQVA AAITIFVWGI AAFATVPPLQ MRVVEKAAAA PNLASTLNIG AFNVGNAGGA WLGGLVINHG HSLDTLPWVA AAVSVAALLL TWLAARMDAP APTVAQGA
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