| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3322 |
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| Symbol | |
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| ID | 6284602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3741181 |
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| End bp | 3741894 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622896 |
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| Product | MIP family channel protein |
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| Protein accession | YP_001896937 |
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| Protein GI | 187925295 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.218114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCTT ACATTGCTGA ATTCATCGGC ACTGCGCTCG TGGTGCTGCT CGGCGACGGC
GCCGTCGCCA ACGTGCTGCT CGCGCGCACC AAAGGCAAAG GCGCGGACCT GATCGTGATC
GTCATGGGCT GGGCGATGGC CGTGTTCATC GCCGTCTATG TCACCGCGTC GTTCAGCGGC
GCTCATCTGA ATCCTGTCGT GACCATCAGC CTCGCGCTGG CCGGCAAGTT CGCCTGGGCC
AAGGTGCCCG GCTATATCGC GGCGCAAATG CTCGGCGGCA TGGCCGGCGC GCTGCTCGTA
TGGATCGCGT ATCGGCAGCA CTTCGCCAAA GAAGGCGATG CCGATGTGAA GCTCGGCGTG
TTCTGCACCT CGCCGGCAAT ACGCAGCGTG CCGCACAACC TGCTCACGGA AATGATCGCC
ACCTTCGTGC TGATTCTGGG CGTGCTGTAT CTGGCTTCGC CGCAAGTCGG TCTCGGTGCG
CTCGACGCGC TCCCGGTCGG CCTGCTGGTT CTCGGCATCG GCATCTCGCT CGGCGGCCCG
ACCGGTTACG CGATGAGTCC CGCTCGTGAT CTGTCGCCTC GTTTGATGCA CGCGCTGCTG
CCGATTCCGG GCAAGCGCGA CAGCGACTGG CACTACGCGT GGATTCCAGT TTGCGGGCCG
CTGCTGGGCG GCGCGGCGGC GGCGTGTTTG TACCTGTATC TGCACGTGCA CTGA
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| Protein sequence | MSPYIAEFIG TALVVLLGDG AVANVLLART KGKGADLIVI VMGWAMAVFI AVYVTASFSG
AHLNPVVTIS LALAGKFAWA KVPGYIAAQM LGGMAGALLV WIAYRQHFAK EGDADVKLGV
FCTSPAIRSV PHNLLTEMIA TFVLILGVLY LASPQVGLGA LDALPVGLLV LGIGISLGGP
TGYAMSPARD LSPRLMHALL PIPGKRDSDW HYAWIPVCGP LLGGAAAACL YLYLHVH
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