Gene Bphyt_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3318 
Symbol 
ID6284598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand+ 
Start bp3736605 
End bp3737234 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content65% 
IMG OID642622892 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001896933 
Protein GI187925291 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.706239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.445875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAA CGCTCTCCCC CGACGACATC CAGCAATTCC GCGAAGCCAT GCGGCACGTG 
GCCGAGAATG CATTCGCCAC GCGTGGCGCC GAAGGCGTGA CGATGCGTGA ACTGGCGAGA 
GAACTGGGTT GCAGCGCCAT GACGCCCTAC CGCTACTTCC GCGACAAGGA CGAGATTCTC 
GCGATGGTGC GCGCCGCGGC GTTCAATCGC TTCGCGGCGC GCCTCGAAGC GGCGGCGCAG 
ACCGCCCCGG AAACGGATCA CTCGGTGGTG AGCGAAGCCT ACGTGGCGTT CGCACTCGAC 
GAACCGCACG CCTATCGGTT GATGTTCGAT CTGGCTCAGC ACGCAAGCGT TTATCCGGAA 
CTCGCCGCCG CCTCACAGCG CGCGTGGCGC ATGCTCGGCG AGCACTTCGA GCGGCTCGTA 
ACCGCGGGCA TTCTGGAAGG CGATCCGCAG CTGATCGGTT ACGCGTACTG GGCGAGTCTG 
CACGGCTTCA CCATGCTGGC GCTGGCTAAT CAGTTGCCGT TGCCACAGGT GCAGCAACCT 
GCGGGCGCCG TCAATTCGCC CACGCGCGAA GCCGTGTTCG CGCAAATTCG CCGCATGTTA 
TGGCGCGGCG CGCAGGCGCA GCACGGATAG
 
Protein sequence
MPKTLSPDDI QQFREAMRHV AENAFATRGA EGVTMRELAR ELGCSAMTPY RYFRDKDEIL 
AMVRAAAFNR FAARLEAAAQ TAPETDHSVV SEAYVAFALD EPHAYRLMFD LAQHASVYPE 
LAAASQRAWR MLGEHFERLV TAGILEGDPQ LIGYAYWASL HGFTMLALAN QLPLPQVQQP 
AGAVNSPTRE AVFAQIRRML WRGAQAQHG