| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3316 |
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| Symbol | |
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| ID | 6284238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3735101 |
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| End bp | 3735880 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622890 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_001896931 |
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| Protein GI | 187925289 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.302839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.645793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAG ACCCCCGCCT GACTCTCAAT GCTCGGCAAC AGGAACTGCT GGAGTGGGTG
CAACGCGACG GCTTCGTGAC CGTGGATGAC CTCGCGGCCC ACTTCGACGT GACGCCGCAG
ACGATCCGCC GCGACGTCAA CTGGCTCGCC GATATGAACC TGCTGCGCCG CTACCACGGC
GGCGCAAGTC TGCCGACCAG TTCCGAAAAC GTCTCCTATA CGGCGCGTCA GCGCATGTTC
CATGACGAAA AGCGTCGCAT TGCGGCGTTA GTGGCCACTC ACATTCCCGA TCAGGCTTCG
CTCTTCATCA ATCTCGGCAC CACCACCGAA GAAGTGGCGC GCGCACTCAA TCGGCATCGC
GGCCTGCGCG TGATCACCAA CAACCTGAAC GTCGCCAGCA TGATGAGCGG CTATCCGGAT
TGCGAGGTGC TGGTGACCGG CGGCATCGTG CGACCGTGGG ATAAAGGTAT CGTCGGCGAG
CTGGCGATCG ATTTCATCCG GCAGTTCAAA GTGGACTTCG CGATCATCGG CACGTCGAGC
ATTGAAACGG ACGGCACGCT GCGCGACTTC GACACGCGCG AGGTTCGCGT GGCGGAGGCC
ATCATCCAGC ATGCACGCAC CGTTTTCCTC GCCGCCGACA ACTCGAAATT CGGCCGCCCT
GCGCTGGTTC GCCAAGGCCA TCTCGATCAG ATCGACGCCT TGTTCACGGA CATTGCACCA
CCCGCCGAGA TGGCCGAAAC GCTCACAGCT GCCAATTGCC AAGTGTATAT CGCCGACTGA
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| Protein sequence | MTRDPRLTLN ARQQELLEWV QRDGFVTVDD LAAHFDVTPQ TIRRDVNWLA DMNLLRRYHG
GASLPTSSEN VSYTARQRMF HDEKRRIAAL VATHIPDQAS LFINLGTTTE EVARALNRHR
GLRVITNNLN VASMMSGYPD CEVLVTGGIV RPWDKGIVGE LAIDFIRQFK VDFAIIGTSS
IETDGTLRDF DTREVRVAEA IIQHARTVFL AADNSKFGRP ALVRQGHLDQ IDALFTDIAP
PAEMAETLTA ANCQVYIAD
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