Gene Bphyt_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3311 
Symbol 
ID6284233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3728148 
End bp3729695 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content66% 
IMG OID642622885 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_001896926 
Protein GI187925284 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.23551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.773236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTG ATTCCCTCGG CTTGTCCGAA CCGTTGGTCC GCGCTGTACA CGAACTCGGC 
TACACCACTC CGACTCCGAT CCAGACGCAA GCGATTCCCG CCGTGCTCAA TGGCGGCGAC
CTGCTGGCCG GGGCGCAAAC CGGCACCGGC AAGACTGCCG GCTTTACGCT GCCGATCCTG
CAACGTCTGA ACACCATGCC CGCCGTGACG ACCGGCTCGG GCAAGCGCGC GGTGCGCGCG
CTGATCCTCA CGCCTACGCG TGAACTGGCC GCGCAGGTCG AAGAAAGCGT GCGCGCGTAC
GGCAAGTATC TGAAGCTGAA GTCGACCGTG ATGTTCGGCG GCGTCGGCAT CAATCCGCAG
ATCGGCGCGC TGCGCAGCGG CGTGGATATC GTCGTCGCGA CGCCGGGCCG TTTGCTCGAC
CACATGCAGC AGAAGACCAT CGACCTGTCG CATCTCGAGA TTCTCGTACT TGACGAAGCC
GATCGCATGC TCGACATGGG TTTCATCCAC GACATCAAGC GCGTGCTGGC GAAGCTGCCG
CCGAAGCGGC AGAACCTGCT GTTCTCGGCC ACCTTCTCCG ACGAGATCAA GACGCTCGCC
GACAATCTGC TCGACTCGCC GGCGCTGATC GAAGTCGCGC GCCGCAATAC GACCGCCGAA
ACGGTGGCGC AGAAGATTCA CCCGGTGGAT CGCGACAAGA AGCGCGAACT GCTCACGCAT
CTGATCAAGC AGCACAACTG GTTTCAGGTG CTGGTGTTCA CGCGTACCAA GCACGGCGCC
AACCGTCTCG CCGAGCAACT GACCAAAGAC AGCATCAGCG CCCTGGCGAT TCACGGCAAC
AAGAGCCAGT CGGCTCGCAC GCGCGCGCTC GCCGAGTTCA AGGACGGCAC GCTGCAGGTG
CTGGTCGCGA CTGACATCGC GGCGCGCGGT ATCGATATCG ACCAGCTGCC GCACGTGGTC
AACTACGATC TGCCGAACGT GCCGGAAGAC TACGTGCACC GCATCGGCCG CACGGGTCGC
GCGGGCGCGA CGGGCGAAGC GATCTCGCTG GTGTGCGTCG ACGAACTGCA GTTGTTGAAG
GACATCGAGA AGCTGATCAA GCGTCCGGTG CCGCAGGAAG TGATCGCCGG TTTCGAACCA
GATCCGACTG CGAAGCCGGA ACCGATTCTG CGTCGCGGCC AAGGTGGCGG CGGCGGTGGT
GGTCGTTCGC CGCGTCAGGG TCAAGGCGCA CCGAAACGTG ATGGCGCGGG TTCGGCAAAA
CCGGCGCAGC GCTCGGGTCA ACGCCCGGCG AACGGTCAAC AGCAGCCGAA GCCGCAAGGT
GCGAAGCCGG CCGGCAATGG CGGCCAGCCG CGTCGCGACG GTCAGCGTCA CGACGACCGG
CCGCGCGCCG TCGCGCATGA GGGCAGCGCC GCGCAGCATG CGCCGCGCAA GCCGCAAGGC
GCGAAACCGC AAGGCGGCAA TCCGGGTGCG TTGCTGGGCG GCGCCAAGCC GCGCAACGAC
GCGCCGCGCG GTGGCCAGCC CACGCGCAGC GGTCAACGCG GCCGTTAA
 
Protein sequence
MSFDSLGLSE PLVRAVHELG YTTPTPIQTQ AIPAVLNGGD LLAGAQTGTG KTAGFTLPIL 
QRLNTMPAVT TGSGKRAVRA LILTPTRELA AQVEESVRAY GKYLKLKSTV MFGGVGINPQ
IGALRSGVDI VVATPGRLLD HMQQKTIDLS HLEILVLDEA DRMLDMGFIH DIKRVLAKLP
PKRQNLLFSA TFSDEIKTLA DNLLDSPALI EVARRNTTAE TVAQKIHPVD RDKKRELLTH
LIKQHNWFQV LVFTRTKHGA NRLAEQLTKD SISALAIHGN KSQSARTRAL AEFKDGTLQV
LVATDIAARG IDIDQLPHVV NYDLPNVPED YVHRIGRTGR AGATGEAISL VCVDELQLLK
DIEKLIKRPV PQEVIAGFEP DPTAKPEPIL RRGQGGGGGG GRSPRQGQGA PKRDGAGSAK
PAQRSGQRPA NGQQQPKPQG AKPAGNGGQP RRDGQRHDDR PRAVAHEGSA AQHAPRKPQG
AKPQGGNPGA LLGGAKPRND APRGGQPTRS GQRGR