Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3311 |
Symbol | |
ID | 6284233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3728148 |
End bp | 3729695 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642622885 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_001896926 |
Protein GI | 187925284 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.23551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.773236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTG ATTCCCTCGG CTTGTCCGAA CCGTTGGTCC GCGCTGTACA CGAACTCGGC TACACCACTC CGACTCCGAT CCAGACGCAA GCGATTCCCG CCGTGCTCAA TGGCGGCGAC CTGCTGGCCG GGGCGCAAAC CGGCACCGGC AAGACTGCCG GCTTTACGCT GCCGATCCTG CAACGTCTGA ACACCATGCC CGCCGTGACG ACCGGCTCGG GCAAGCGCGC GGTGCGCGCG CTGATCCTCA CGCCTACGCG TGAACTGGCC GCGCAGGTCG AAGAAAGCGT GCGCGCGTAC GGCAAGTATC TGAAGCTGAA GTCGACCGTG ATGTTCGGCG GCGTCGGCAT CAATCCGCAG ATCGGCGCGC TGCGCAGCGG CGTGGATATC GTCGTCGCGA CGCCGGGCCG TTTGCTCGAC CACATGCAGC AGAAGACCAT CGACCTGTCG CATCTCGAGA TTCTCGTACT TGACGAAGCC GATCGCATGC TCGACATGGG TTTCATCCAC GACATCAAGC GCGTGCTGGC GAAGCTGCCG CCGAAGCGGC AGAACCTGCT GTTCTCGGCC ACCTTCTCCG ACGAGATCAA GACGCTCGCC GACAATCTGC TCGACTCGCC GGCGCTGATC GAAGTCGCGC GCCGCAATAC GACCGCCGAA ACGGTGGCGC AGAAGATTCA CCCGGTGGAT CGCGACAAGA AGCGCGAACT GCTCACGCAT CTGATCAAGC AGCACAACTG GTTTCAGGTG CTGGTGTTCA CGCGTACCAA GCACGGCGCC AACCGTCTCG CCGAGCAACT GACCAAAGAC AGCATCAGCG CCCTGGCGAT TCACGGCAAC AAGAGCCAGT CGGCTCGCAC GCGCGCGCTC GCCGAGTTCA AGGACGGCAC GCTGCAGGTG CTGGTCGCGA CTGACATCGC GGCGCGCGGT ATCGATATCG ACCAGCTGCC GCACGTGGTC AACTACGATC TGCCGAACGT GCCGGAAGAC TACGTGCACC GCATCGGCCG CACGGGTCGC GCGGGCGCGA CGGGCGAAGC GATCTCGCTG GTGTGCGTCG ACGAACTGCA GTTGTTGAAG GACATCGAGA AGCTGATCAA GCGTCCGGTG CCGCAGGAAG TGATCGCCGG TTTCGAACCA GATCCGACTG CGAAGCCGGA ACCGATTCTG CGTCGCGGCC AAGGTGGCGG CGGCGGTGGT GGTCGTTCGC CGCGTCAGGG TCAAGGCGCA CCGAAACGTG ATGGCGCGGG TTCGGCAAAA CCGGCGCAGC GCTCGGGTCA ACGCCCGGCG AACGGTCAAC AGCAGCCGAA GCCGCAAGGT GCGAAGCCGG CCGGCAATGG CGGCCAGCCG CGTCGCGACG GTCAGCGTCA CGACGACCGG CCGCGCGCCG TCGCGCATGA GGGCAGCGCC GCGCAGCATG CGCCGCGCAA GCCGCAAGGC GCGAAACCGC AAGGCGGCAA TCCGGGTGCG TTGCTGGGCG GCGCCAAGCC GCGCAACGAC GCGCCGCGCG GTGGCCAGCC CACGCGCAGC GGTCAACGCG GCCGTTAA
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Protein sequence | MSFDSLGLSE PLVRAVHELG YTTPTPIQTQ AIPAVLNGGD LLAGAQTGTG KTAGFTLPIL QRLNTMPAVT TGSGKRAVRA LILTPTRELA AQVEESVRAY GKYLKLKSTV MFGGVGINPQ IGALRSGVDI VVATPGRLLD HMQQKTIDLS HLEILVLDEA DRMLDMGFIH DIKRVLAKLP PKRQNLLFSA TFSDEIKTLA DNLLDSPALI EVARRNTTAE TVAQKIHPVD RDKKRELLTH LIKQHNWFQV LVFTRTKHGA NRLAEQLTKD SISALAIHGN KSQSARTRAL AEFKDGTLQV LVATDIAARG IDIDQLPHVV NYDLPNVPED YVHRIGRTGR AGATGEAISL VCVDELQLLK DIEKLIKRPV PQEVIAGFEP DPTAKPEPIL RRGQGGGGGG GRSPRQGQGA PKRDGAGSAK PAQRSGQRPA NGQQQPKPQG AKPAGNGGQP RRDGQRHDDR PRAVAHEGSA AQHAPRKPQG AKPQGGNPGA LLGGAKPRND APRGGQPTRS GQRGR
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