Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3301 |
Symbol | |
ID | 6284517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3718653 |
End bp | 3720191 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622875 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_001896916 |
Protein GI | 187925274 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.970656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCCG ACACTCCGGC GGCCAACGCC GCCGCGCCGC TCAACCGCCC GATGATCACC GTCTCGATCA TGCTGGCGAC GTTGATCCAG ACGCTCGACA GCACGATCGC CAACGTGGCG CTGCCGCATA TGCAGGGCAC GCTGTCCGCG TCGCAGGATG AAATCACGTG GGTGCTGACC TCGTACATCG TCGCCGCCGC GATCGCCACG CCGCTCACCG GCTGGCTGTC CGACCGGCTG AGCGTCAAGC GTCTGCTGAT TTTCGCGATC GGCGGTTTCA CGGTGTCGTC GGCGCTGTGC GGTTTGTCTG AGACGCTCAC GCAGATCGTC GCGTCGCGTT TGCTGCAGGG GATTTTCGGC GCGTCGCTCG TGCCGCTGTC GCAGTCAATC CTGCTCGACA TCAACCCGCG CGAGAAGCAG GGGCAGGCCA TGGCCGTGTG GGGCATGGGC GTGATGGTCG GACCGATTCT CGGGCCGACG CTCGGCGGCT GGCTCACAGA CAGCTACAAC TGGCGCTGGG TGTTTTTCAT CAACGTGCCG ATCGGCGCGT TCGCGCTGTT CGGCGTGGCG ACCTTCCTGC CCGCGCGCGA ACCGAAACAC GACGCGAAGT TCGACGCCTT CGGCTTCGCC ACGCTGGGTC TCGCCATCGG CGCATTGCAG GCCATGCTCG ATCGCGGCGA GCAACTCGAC TGGTTCGGCT CGAACGAAAT CGTTGTCGAG GCGCTGCTCG CGGCGATCAG CTTTGCGTTT TTCCTCGTGC ACACGGCCAC GGTCGGCAAG AAATCGTTTT TCAAATACGA GTTGCTGAAG GATCCGAACT TCGCCACGGG GACGTTTTTC ATCTTCGTGA TCGGCGCGGT AATGTACGCG ACGCGCGCGT TGCTGCCGCC CATGCTGCAG AACCTGATGA ACTATCCGGT CGCGACCACC GGCCTCGTCA CTGCGCCGAG CGGCGCGGGC ACGATGGTCG CCATGCTGTT CGCCGGGCGC CTGCTGAAGC GGATCGACGC GCGGCTTCTG CTGCTGGCGG GCTTTCTGAT CTCGGCGTTC GCGCTCTGGC AGATGATGCA TTACACGATC GTGCTGTCGG CGCCGGACAT TGTCTGGCCC GGCGTGATTC AGGGCTTCGG GCTTGGGCTC GTGTTCGTGC CGCTGAGCGC GCTGACCTTC TCGACGCTCA CGCCGGAACT GCGCGCGGAT GGCACCGCGA CGTACAGCCT GATGCGCAAT ATCGGCAGCA GTATCGGCAT TTCGATCGTG CAAACGCTGA TGACGCGCAA CACGCAGGTC TCGCATGCGG ACCTCGTGGC CAACATCACG CCCTTCAATC CCGCCGTCCA GCCGATGCTC AACAACGGCT CGAATTACGA CATGGCCGCG CTGAACGCGT CGATCACGCA GCAGGCATCG ATGATCGCGT ATCTGAACGA CTTCAAGCTG ATGTTCATGG CGACGCTGCT GGTTATTCCG CTTCTGCTGT TGATCCGCCC CGCGCATAAG GCGGCGGACG CCTCGGTGGC GCATGCCGCG ATGGATTGA
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Protein sequence | MSSDTPAANA AAPLNRPMIT VSIMLATLIQ TLDSTIANVA LPHMQGTLSA SQDEITWVLT SYIVAAAIAT PLTGWLSDRL SVKRLLIFAI GGFTVSSALC GLSETLTQIV ASRLLQGIFG ASLVPLSQSI LLDINPREKQ GQAMAVWGMG VMVGPILGPT LGGWLTDSYN WRWVFFINVP IGAFALFGVA TFLPAREPKH DAKFDAFGFA TLGLAIGALQ AMLDRGEQLD WFGSNEIVVE ALLAAISFAF FLVHTATVGK KSFFKYELLK DPNFATGTFF IFVIGAVMYA TRALLPPMLQ NLMNYPVATT GLVTAPSGAG TMVAMLFAGR LLKRIDARLL LLAGFLISAF ALWQMMHYTI VLSAPDIVWP GVIQGFGLGL VFVPLSALTF STLTPELRAD GTATYSLMRN IGSSIGISIV QTLMTRNTQV SHADLVANIT PFNPAVQPML NNGSNYDMAA LNASITQQAS MIAYLNDFKL MFMATLLVIP LLLLIRPAHK AADASVAHAA MD
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