| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3295 |
|---|
| Symbol | recA |
|---|
| ID | 6282142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3711810 |
|---|
| End bp | 3712886 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642622868 |
|---|
| Product | recombinase A |
|---|
| Protein accession | YP_001896910 |
|---|
| Protein GI | 187925268 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0468] RecA/RadA recombinase |
|---|
| TIGRFAM ID | [TIGR02012] protein RecA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.303399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.877549 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAA GCAAGAAAGG CTCGGCTGGA CTGACGGCTG AAAAGAGCAA GGCACTCGCT
GCCGCACTCG CACAGATCGA AAAGCAGTTC GGCAAAGGGT CGGTCATGCG GCTCGGCGCA
GGTGAGGCGG TCGAAGACAT CCAGGTGGTC TCAACCGGAT CGCTCGGCCT CGACATCGCT
CTGGGCGTCG GCGGTTTGCC GCGTGGCCGT GTGGTCGAAA TTTATGGCCC GGAATCGTCC
GGTAAAACCA CGCTGACGTT GCAGGTCGTC GCCGAAATGC AGAAGCTCGG CGGCACGGCA
GCGTTTATCG ACGCGGAACA CGCGCTGGAC ATCCAGTACG CGGGCAAGCT CGGCGTGAAC
GTGAACGAGT TGCTGGTTTC GCAGCCGGAT ACCGGTGAAC AGGCGCTTGA AATTGCCGAC
GCACTCGTGC GCTCGGGCTC GATCGACATG ATCGTGATCG ACTCGGTCGC GGCACTCGTG
CCGAAGGCTG AAATCGAAGG CGAAATGGGC GACTCGCTGC CGGGTCTGCA AGCGCGTCTG
ATGTCGCAAG CGCTGCGCAA GCTCACCGGC ACGATCAAGC GCACGAACTG TCTCGTGATC
TTCATCAACC AGATCCGCAT GAAGATCGGC GTGATGTTCG GCAATCCGGA AACCACCACG
GGTGGTAACG CGCTGAAGTT CTACGCGTCG GTGCGTCTGG ACATTCGCCG TATCGGTTCG
ATCAAGAAGA ACGACGAAGT GATCGGCAAC GAAACGCGCG TGAAGGTGGT GAAGAACAAG
GTGGCTCCGC CGTTCCGCGA AGCGATTTTC GACATTCTTT ACGGCGAAGG CATTTCGCGT
CAGGGCGAAA TCATCGATCT GGGCGTGCAG GCCAAGATCG TCGACAAGGC CGGCGCGTGG
TACAGCTACA GCGGCGAACG TATCGGTCAG GGTAAGGACA ACGCGCGTGA ATTCCTGCGC
GAAAATCCGG ATATTGCTCG CGAGATCGAA AACCGTATCC GTGAATCGCT GGGCGTGAAT
GCCATGGCTG AAGCCGTGAC CGGCGCAGCC GCTGAAGTCG CGGACGAAGA AGAGTAA
|
|---|
| Protein sequence | MEESKKGSAG LTAEKSKALA AALAQIEKQF GKGSVMRLGA GEAVEDIQVV STGSLGLDIA
LGVGGLPRGR VVEIYGPESS GKTTLTLQVV AEMQKLGGTA AFIDAEHALD IQYAGKLGVN
VNELLVSQPD TGEQALEIAD ALVRSGSIDM IVIDSVAALV PKAEIEGEMG DSLPGLQARL
MSQALRKLTG TIKRTNCLVI FINQIRMKIG VMFGNPETTT GGNALKFYAS VRLDIRRIGS
IKKNDEVIGN ETRVKVVKNK VAPPFREAIF DILYGEGISR QGEIIDLGVQ AKIVDKAGAW
YSYSGERIGQ GKDNAREFLR ENPDIAREIE NRIRESLGVN AMAEAVTGAA AEVADEEE
|
|---|
| |