Gene Bphyt_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3290 
Symbol 
ID6281979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3707184 
End bp3707888 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content65% 
IMG OID642622863 
ProductIntegral membrane protein TerC 
Protein accessionYP_001896905 
Protein GI187925263 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0586627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGT TCTTCGCCAC GCTTCACTGG GGCGCCGTCA TCCAGATCAT CGTCATCGAC 
ATTCTGCTGG GTGGCGATAA CGCGGTCGTG ATCGCGCTGG CCTGCCGCAA TTTACCGCCG
GCCCAACGCA CGAAAGGCGT GCTGTGGGGC ACGGCAGGCG CGATCGTGCT GCGCGTGGCG
TTGATCGCGT TCGCGGTCGC GCTGCTCGAT GTGCCGCTGC TCAAGTTCGC GGGCGGACTG
TTGCTGCTGT GGATCGGCGT GCGTCTGATG GCGCCGGCGC ACGACCCGCA TGAGAACGTC
AAGCCGGCCG ACAAGCTGAT GTCGGCGATC AAGACCATCA TTGTCGCGGA CGCGGTGATG
AGCCTCGACA ACGTGATCGC GATCGCGGGC GCGGCTGAGG CCGCCGATCC GGAGCACCGT
CTCGCGCTGG TGATTTTCGG GCTGGTGGTG AGCATTCCGT TGATCGTGTG GGGCAGCCAG
CTGGTTCTCA AGCTGCTTGA CCGCTTCCCG ATCGTCATCA CGCTCGGCGC CGGGCTGCTT
GGCTGGATCG CGGGCGGGCT GATCATCAAC GACCCGGCAG GCGATCGTTG GCCGATCCTC
GATACGCCAT TGGCCGAATA CGGCATGAGC ATCGCGGGGG CGTTGTTCGT CGTCGTCCTC
GGCTATCTGC TCAAGCGCCG CAACGCCCAT CGCGCGGCGG CTTGA
 
Protein sequence
MLEFFATLHW GAVIQIIVID ILLGGDNAVV IALACRNLPP AQRTKGVLWG TAGAIVLRVA 
LIAFAVALLD VPLLKFAGGL LLLWIGVRLM APAHDPHENV KPADKLMSAI KTIIVADAVM
SLDNVIAIAG AAEAADPEHR LALVIFGLVV SIPLIVWGSQ LVLKLLDRFP IVITLGAGLL
GWIAGGLIIN DPAGDRWPIL DTPLAEYGMS IAGALFVVVL GYLLKRRNAH RAAA