| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3289 |
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| Symbol | |
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| ID | 6281978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3706417 |
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| End bp | 3707040 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642622862 |
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| Product | putative type IV fimbrial pilin protein |
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| Protein accession | YP_001896904 |
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| Protein GI | 187925262 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.213615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTCA CTTTGCCTTA TTCCCCTTAC TCCCAGTCCT CGCTGGCCAC GCGCTCACGA
TCTTGCCGGG CTGGCTGGTC AGCGCGGCTC GCGCGGGCCT GCCGACGCCT CGGCTTCGGT
TTCACGCTGA TCGAACTGAT GATCGTGCTG GCTATCGTCG GCGTGATCGC CGCTTATGCG
ATTCCCGCGT ATCAGGACTA TCTGGCTCGC AGCCGCGTCG GCGAAGGGCT CTCGCTGGCG
GCGTCCGCAA GGTTGGCGGT GGCTGAAAAC GCCACGAGCG GTAACACGTT CAGCGGCGGC
TATGCGTCGC CGCCCGCCAC CCGCAACGTC GAGTCCATTC GGGTCGACGA CGACACCGGC
CAGATCACCG TCGCCTTCAC GACGCGCGTC GCAGCGGTTG GTTCGAACAC GCTCACGCTC
GTGCCGTCGG TGCCCGACAA TGCGGATGCG CCGACTGCGC GCGTCGCGTT GAGCAAGGGC
AGTGTGCAGG CGGGCGCGCT CACGTGGGAA TGTTTCGCGG GCGGCAAAGC GGCGTCCTCG
CTGCCGGCGC CCGGCGCAGG TCCAGCACCC GCCGATGCGC CCACGTTGCC GTCAAATCTC
GCCCCACCGG AGTGCCGTTC GTGA
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| Protein sequence | MIFTLPYSPY SQSSLATRSR SCRAGWSARL ARACRRLGFG FTLIELMIVL AIVGVIAAYA
IPAYQDYLAR SRVGEGLSLA ASARLAVAEN ATSGNTFSGG YASPPATRNV ESIRVDDDTG
QITVAFTTRV AAVGSNTLTL VPSVPDNADA PTARVALSKG SVQAGALTWE CFAGGKAASS
LPAPGAGPAP ADAPTLPSNL APPECRS
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