| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3279 |
|---|
| Symbol | |
|---|
| ID | 6281324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3696172 |
|---|
| End bp | 3696918 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642622852 |
|---|
| Product | AzlC family protein |
|---|
| Protein accession | YP_001896894 |
|---|
| Protein GI | 187925252 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.981424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCTC GCCTGTCAGA TACCAATCGC CGTGCCTTCC GCCAAGGCGC GCGCGACTAT
TCGCCCACCC TGATGGCGAT TTTCTCCTGG GGGCTCGTCA CCGGCATCGC CATGAGCAAA
TCGGTGCTCA CGTTGCCGCA GTCGCTCACC ATGTCGCTGC TGTGCTACGC CGGCTCGTCG
CAACTGGCGG TGCTGCCTCT GCTCGCAGCC AAGCTGCCGA TCTGGACCGT GCTGCTCACC
GCGGCGATGG TCAATACGCG TTTCGTGATC TTCAGTGTCG GACTCGCGCC GCATTTTTCG
TATCTGCCGA TGTGGCGGCG CATCGTGCTC GGCTACTTCA ACGGCGACGT GATCTATCTG
CTGTTCCAGA AGAAGAGCTT CCCGACGGGC TATGTGCCGG GCAAGGAGGC GTACTACTGG
GGCATGGCGA TTTGCAGCTG GCTGTCGTGG CAGGTGTCGT CCATCGCCGG GATTTTGCTG
GCGAGCCTGA TTCCCGATAA CTGGGGCCTC GCGCTGGCGG GCACGCTGGC TTTGCTGCCC
ATCATGGTGT CGGCAATCGC GACGCGCTCC ACGCTGGTCG CGGTGGGCAT CGCCGGTGTG
GTGTCGCTGC TCGCTTTCGA TCTGCCGTAC CGGCTTGCGC TGCCGCTCGC GGTGATCGCG
GCAATCATCG CCGGCAGCGC CGCCGACCTG ATGGTCGAGC GCGCCGACTT GCGCCGCATC
CGCAACAGCG CCGGAGATTC CCGATGA
|
|---|
| Protein sequence | MLARLSDTNR RAFRQGARDY SPTLMAIFSW GLVTGIAMSK SVLTLPQSLT MSLLCYAGSS
QLAVLPLLAA KLPIWTVLLT AAMVNTRFVI FSVGLAPHFS YLPMWRRIVL GYFNGDVIYL
LFQKKSFPTG YVPGKEAYYW GMAICSWLSW QVSSIAGILL ASLIPDNWGL ALAGTLALLP
IMVSAIATRS TLVAVGIAGV VSLLAFDLPY RLALPLAVIA AIIAGSAADL MVERADLRRI
RNSAGDSR
|
|---|
| |