Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3279 |
Symbol | |
ID | 6281324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3696172 |
End bp | 3696918 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622852 |
Product | AzlC family protein |
Protein accession | YP_001896894 |
Protein GI | 187925252 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.981424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCTC GCCTGTCAGA TACCAATCGC CGTGCCTTCC GCCAAGGCGC GCGCGACTAT TCGCCCACCC TGATGGCGAT TTTCTCCTGG GGGCTCGTCA CCGGCATCGC CATGAGCAAA TCGGTGCTCA CGTTGCCGCA GTCGCTCACC ATGTCGCTGC TGTGCTACGC CGGCTCGTCG CAACTGGCGG TGCTGCCTCT GCTCGCAGCC AAGCTGCCGA TCTGGACCGT GCTGCTCACC GCGGCGATGG TCAATACGCG TTTCGTGATC TTCAGTGTCG GACTCGCGCC GCATTTTTCG TATCTGCCGA TGTGGCGGCG CATCGTGCTC GGCTACTTCA ACGGCGACGT GATCTATCTG CTGTTCCAGA AGAAGAGCTT CCCGACGGGC TATGTGCCGG GCAAGGAGGC GTACTACTGG GGCATGGCGA TTTGCAGCTG GCTGTCGTGG CAGGTGTCGT CCATCGCCGG GATTTTGCTG GCGAGCCTGA TTCCCGATAA CTGGGGCCTC GCGCTGGCGG GCACGCTGGC TTTGCTGCCC ATCATGGTGT CGGCAATCGC GACGCGCTCC ACGCTGGTCG CGGTGGGCAT CGCCGGTGTG GTGTCGCTGC TCGCTTTCGA TCTGCCGTAC CGGCTTGCGC TGCCGCTCGC GGTGATCGCG GCAATCATCG CCGGCAGCGC CGCCGACCTG ATGGTCGAGC GCGCCGACTT GCGCCGCATC CGCAACAGCG CCGGAGATTC CCGATGA
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Protein sequence | MLARLSDTNR RAFRQGARDY SPTLMAIFSW GLVTGIAMSK SVLTLPQSLT MSLLCYAGSS QLAVLPLLAA KLPIWTVLLT AAMVNTRFVI FSVGLAPHFS YLPMWRRIVL GYFNGDVIYL LFQKKSFPTG YVPGKEAYYW GMAICSWLSW QVSSIAGILL ASLIPDNWGL ALAGTLALLP IMVSAIATRS TLVAVGIAGV VSLLAFDLPY RLALPLAVIA AIIAGSAADL MVERADLRRI RNSAGDSR
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