| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3268 |
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| Symbol | |
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| ID | 6283585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3682826 |
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| End bp | 3684406 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622841 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001896883 |
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| Protein GI | 187925241 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTGC CGCGCCGCTT CGCGCCGCGC GCCATGGCCT GGCTATTCGC CTGTGCCGCG
CTCGGCTTTG GCGCATCGCT GCCGCTCGCT GCGCAGGCTC GCGTCAAGGC CACGCGCCCG
AGCGTCAACG TCACCACCGT CTTGCCTCAA TCGGTGATGC TCGGCTTGCA GCGCGCGCAC
GTACCCTTGT CGTCGATCAG CGTGGTCGTG GAGAAAGTCG GCGATCGCAC GCCGATCCTC
GCACTGAACG CCGGCAAGCC GATGATGCCC GCCTCGACGA TGAAACTCGT CACCACCTAC
TCAGGCCTGT CGATACTCGG CCCCGACTAC CGCTGGCGCA CGAGCGCCTA CGCGGACGGC
ACCATCGACG CCAACGGCGT GCTGCACGGC AATCTCTACA TTCAGGGCAC GGGCGATCCG
AAGCTCGTGC CGGAAGAACT GATCGACCTC GTGCAGAAGA TCCACAAGGC GGGCATCAAC
GGTATCGACG GCGCGCTGGT GCTCGACAAG CGCTACTTCG ATCCGTCCAC GCGCGACCTG
CCGCCCTTCG ACGACGACAC CACCGCGCCG TACAACGTCG GTCCCGATCC GCTGCTGTAT
GCATTCAAGT CGCTGTCGTT CACGCTGACG CCGTCGCCCG ACGGCAGCGT GGCAATCGAC
GTACTGCCCG CGCTCGCGCA ATTGCAGATC GACAACCAGA TGCACGCGGT GAACGGCCCG
TGCCGCGGCG ACGCGGCCTC GGTGTCGCCC ACCGTCACGC CGCAGCCGAA CGGCACCGTC
GTGGCCTCGT TCAGCGGCGA CTATTCGGTG CGCTGCGGCC CGCGCACGAT CAACGTCGCG
GTACTCGACC ACTCCGCGTT TTTCGCTGGC GGTTTTCTCG CGCTGTGGCA GCAAACCGGC
GGCACGTTCA GCGGCGCGAC GCGCGAAGGC GCGGTGCCCG TCGGCGCCAA ACTGGTCGCT
ACGCATCAGG GGCCGGTGCT GTCCGACATC GTTCGCGACA TCAATAAGTT CAGCAACAAC
ACGATGGCGC GCAACCTGTT CCTGACGATC GGCGCCGCCG AAGAAAAAGG ACCCGCGACG
ACCGCCAAAT CGGCGCGTGC AATTCAGGCG TTTCTGCGCC GCGACAGCGT CGATATGGAA
TATCTGACGC TCGATAACGG CTCGGGCCTG TCGCGCGAAG AGCATGTCAC CGCGCTCTCG
CTCGCTGATC TATTGCAGCG AGCCAATGCA AGTCCGGTCG CGCAGGTGTT CGTGGAGTCG
TTGCCGATCG CGGGCGTCGA CGGCACCATG CGCAACCGCT TGACCAACCA GGGCGCGGGC
GGCAATGCGC ACATCAAGAC GGGCACCTTG CGCGACGTTC GGGCGATCGC GGGCTACGTG
GCTTCGGCGG ACGGTAACAG TTACGTGGTG GTCAGCCTGA TCAACGATCC GCATTCGGAA
GCCGCGCGCG CCGCGCACGA CGCGCTGCTC GAATGGGTGT ATCAAGGGCC GTCGCAGGGC
TTCACCAAGG TGTCCGAACC GGTCGTCGAA CCACGCAGCA TCAAGCCCAG GAAAAACCCG
CACAAGCGCG GCGCTCACTG A
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| Protein sequence | MHLPRRFAPR AMAWLFACAA LGFGASLPLA AQARVKATRP SVNVTTVLPQ SVMLGLQRAH
VPLSSISVVV EKVGDRTPIL ALNAGKPMMP ASTMKLVTTY SGLSILGPDY RWRTSAYADG
TIDANGVLHG NLYIQGTGDP KLVPEELIDL VQKIHKAGIN GIDGALVLDK RYFDPSTRDL
PPFDDDTTAP YNVGPDPLLY AFKSLSFTLT PSPDGSVAID VLPALAQLQI DNQMHAVNGP
CRGDAASVSP TVTPQPNGTV VASFSGDYSV RCGPRTINVA VLDHSAFFAG GFLALWQQTG
GTFSGATREG AVPVGAKLVA THQGPVLSDI VRDINKFSNN TMARNLFLTI GAAEEKGPAT
TAKSARAIQA FLRRDSVDME YLTLDNGSGL SREEHVTALS LADLLQRANA SPVAQVFVES
LPIAGVDGTM RNRLTNQGAG GNAHIKTGTL RDVRAIAGYV ASADGNSYVV VSLINDPHSE
AARAAHDALL EWVYQGPSQG FTKVSEPVVE PRSIKPRKNP HKRGAH
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