Gene Bphyt_3252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3252 
Symbol 
ID6283116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3661698 
End bp3662549 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content65% 
IMG OID642622825 
ProductS-formylglutathione hydrolase 
Protein accessionYP_001896867 
Protein GI187925225 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.499772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAC TCTTGTCGTC GCATGCCTGT CATGGCGGCG AGCAGCGCAT CTATCGGCAC 
GACTCGCAGA CCATCGGCCT GTCGATGCGC TTCTCGATCT ATCTGCCGCC GCAGGCCCTG
CAGGCCAACG CGAACGTGCC CGCGCTGTTC TATCTCGCGG GCCTCACTTG CACGGAAGAA
ACCTTTCCGG TCAAAGCCGG CGCGCAACGT TTCGCCGCGC AGCACGGCAT TGCGTTGATC
GCGCCGGATA CGAGTCCGCG CGGCGCGGGC GTGCCGGGCG AAAGCGCGGC GTGGGACTTC
GGCGTGGGCG CGGGCTTTTA CGTCGATGCC ACGCAGCAGC CGTGGGCGCA GCACTACCGG
ATGTACTCAT ACGTGCGGGA CGAACTGCGT GAAATGGTGC TCGCGAATTT GCCGGTGGAC
GGCGCGCGTC TGGGCGTCTT CGGGCATTCG ATGGGCGGCC ACGGCGCGTT GATGCTCGCG
TTGCGCAATC CGGAGATTTA TCGGTCGGTG TCGGCGTTCG CGCCGATCGC CGCGCCGACG
CGTTGCCCGT GGGGCGAAAA AGCGTTCAGC GGCTATCTGG GCGACGACCG CGAAGCGTGG
AAACAGTACG ACGCGAGCGA ACTGGTCGCG CGTACGTCGC GCAAGTTCTC GGAAGGGATT
CTGGTCGATC AGGGGCTCGC GGATCAGTTC CTCGCGGAGC AACTGAATCC GGATGTGTTC
GAAGCCGCTT GCCAGGCCGC AGGTCAACCG CTGACGTTGC GCCGTCATGC GGGCTACGAC
CACGGCTATT ACTTCATCTC GACGTTCGTC GAGGATCACC TCGCGCATCA CGCGAAGGTG
CTGCTCGGCT GA
 
Protein sequence
MLELLSSHAC HGGEQRIYRH DSQTIGLSMR FSIYLPPQAL QANANVPALF YLAGLTCTEE 
TFPVKAGAQR FAAQHGIALI APDTSPRGAG VPGESAAWDF GVGAGFYVDA TQQPWAQHYR
MYSYVRDELR EMVLANLPVD GARLGVFGHS MGGHGALMLA LRNPEIYRSV SAFAPIAAPT
RCPWGEKAFS GYLGDDREAW KQYDASELVA RTSRKFSEGI LVDQGLADQF LAEQLNPDVF
EAACQAAGQP LTLRRHAGYD HGYYFISTFV EDHLAHHAKV LLG