Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3247 |
Symbol | |
ID | 6283111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3657289 |
End bp | 3658071 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622820 |
Product | sorbitol dehydrogenase |
Protein accession | YP_001896862 |
Protein GI | 187925220 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0320221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.626785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGCAC GATTGCAAGA CAAGGTGGCC ATTCTGACGG GCGCGGCAAG CGGAATCGGT GAAGCCGTGG CGCGGCGATA TCTGGACGAA GGCGCGCGCT GCGTGCTGGT CGACGTGAAG CCGGCCGACA GTTTTGGAGA CTCGCTGCGC GCCACTTACG GCGATCGCGT GCTGACCGTG AGCGCCGATG TCACGCGGCG CGACGACATC CAGCGCATCG TGGCGAGCAC GCTGGAGCGC TTCGGGCAAA TCGACATTCT CTTCAACAAC GCGGCGCTGT TCGACATGCG CCCGATTCTC GAAGAATCCT GGGACGTGTT CGACCGCCTC TTCGCGGTCA ACGTGAAGGG CATGTTCTTC CTGATGCAAG CCGTGGCGCA AAAGATGGTC GAGCAGGGCT GCGGCGGCAA GATCATCAAT ATGTCGTCGC AAGCCGGGCG GCGCGGCGAG GCGCTCGTGT CGCACTACTG CGCGACCAAA GCCGCCGTGC TCAGCTACAC GCAATCCGCG GCATTGGCGC TTGCGCCGCA CAAGATCAAC GTGAATGGCA TCGCGCCGGG TGTCGTCGAT ACGCCGATGT GGAACGAAGT CGATGCGCTC TTCGCTCGCT ATGAAAACCG CCCGCTCGGC GAGAAGAAAC GCCTTGTCGG CGAAGCGGTG CCGCTTGGCC GCATGGGTGT GCCGGACGAT CTGACCGGCG CCGCTTTGTT CCTCGCATCG GCGGATGCCG ACTACATCAC CGCGCAAACC CTGAACGTCG ACGGCGGCAA CTGGATGAGC TAA
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Protein sequence | MAARLQDKVA ILTGAASGIG EAVARRYLDE GARCVLVDVK PADSFGDSLR ATYGDRVLTV SADVTRRDDI QRIVASTLER FGQIDILFNN AALFDMRPIL EESWDVFDRL FAVNVKGMFF LMQAVAQKMV EQGCGGKIIN MSSQAGRRGE ALVSHYCATK AAVLSYTQSA ALALAPHKIN VNGIAPGVVD TPMWNEVDAL FARYENRPLG EKKRLVGEAV PLGRMGVPDD LTGAALFLAS ADADYITAQT LNVDGGNWMS
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