| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3234 |
|---|
| Symbol | |
|---|
| ID | 6283528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3642516 |
|---|
| End bp | 3643523 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642622807 |
|---|
| Product | Monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001896849 |
|---|
| Protein GI | 187925207 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.197254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC CTAATCCTTC TTCTTCACCC AAGACCTCCA CTGTCAACAG CGATACGCCG
GGCGCGCCGG TGCGTTTCAC GTGGGCCGCA TTGAAACGCT CCACGCTGTT CTATCCGTTC
ATCGGCTTGC TGGTGGTCTG CATCGTGATG GTGTTCGCGA GCGATAGTTT TCTCTCCGGG
GCGAACATCG AGAACGTGCT GCGCCAGGTG TCGATCAACG CGATCATCGC CGTGGGGATG
ACGTGCGTGA TTTTGACCGG CGGTATCGAT CTTTCCGTGG GCTCCGTCAT GGCGCTGGCG
GGCACGCTCG CCGCGGGCTT GATGGTGGCC GGCATGAATG CGGTCGCCGC TCTGGCAATT
GGTATTGCAG TCGGCCTCGG CTTCGGCGCG GCGAACGGTT TTTTCGTGGC CTTTGCCGGC
ATGCCGCCGA TCATCGTCAC GCTCGCGACG ATGGGCATCG CGCGTGGCCT CGCGCTGATC
TACACGGGCG GCTATCCGAT CGACGGCTTG CCGGACTGGG TGAGCTTTTT CGGCAGCGGC
AAGATTCTCG GCGTGCAGGC GCCCGTCGTG ATCATGGCGG TGATCTATGT GATCGCGTGG
GTGCTGCTGG AGCGCATGCC GTTCGGCCGC TATGTCTATG CGATCGGCGG CAACGAACAG
GCCACGCGTC TATCCGGCGT GCGCGTGGCG CGCGTCAAGC TGATCGTCTA CACGATCGCC
GGTTTGACGT CCGCCTTCGC CGCCATTGTG TTGACCGCGC GTTTGATGAG CGGGCAGCCG
AACGCCGGCG TCGGCTTCGA ACTCGACGCC ATCGCCGCCG TGGTGATGGG CGGCACGTCG
ATCTCCGGCG GCCGCGGTTC GATCATCGGC ACGTTGATCG GCGCGCTGCT GCTCGGTGTG
TTGAACAACG GCCTGAACAT GGTCGGCGTG AATCCGTATG TGCAGAACGT GATCAAGGGC
GGAATCATTT TGCTCGCGAT TTACATCAGC CGCGACCGCA GAAAGTAA
|
|---|
| Protein sequence | MNTPNPSSSP KTSTVNSDTP GAPVRFTWAA LKRSTLFYPF IGLLVVCIVM VFASDSFLSG
ANIENVLRQV SINAIIAVGM TCVILTGGID LSVGSVMALA GTLAAGLMVA GMNAVAALAI
GIAVGLGFGA ANGFFVAFAG MPPIIVTLAT MGIARGLALI YTGGYPIDGL PDWVSFFGSG
KILGVQAPVV IMAVIYVIAW VLLERMPFGR YVYAIGGNEQ ATRLSGVRVA RVKLIVYTIA
GLTSAFAAIV LTARLMSGQP NAGVGFELDA IAAVVMGGTS ISGGRGSIIG TLIGALLLGV
LNNGLNMVGV NPYVQNVIKG GIILLAIYIS RDRRK
|
|---|
| |