| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3212 |
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| Symbol | xerD |
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| ID | 6283451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3620739 |
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| End bp | 3621674 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622786 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001896828 |
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| Protein GI | 187925186 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA CGTTGATCGA CGACGCGGCC ACCGCGTCAC CTCTGTTCGT CGCCAGCTCG
GCATCGATCG ATGCTTTTTG CGACGCGCTG TGGCTTGAGC ACGGACTGTC GCGCAACACG
CTCGACGCGT ACCGCCGCGA TCTGCGGCTC TTTTGCGAAT GGCTCGCGCA GAGCCGCAAT
GCCTCGCTCG ACACCGCGAG CGAGGCCGAT CTGAACGCCT ATAGCGCGGC GCGGCGGAAA
GACAAATCGA CTTCGGCGAA TCGGCGGCTT TCTGTATTTC GCCGCTACTA CGGCTGGGCC
GTTCGCGAGC ATCGCACCAA GGTCGATCCG ACCGTGCGCA TCCGCTCGGC GAAACAGCCG
CCACGTTTTC CGTCCACGCT CAGCGAGGCG CAAGTCGAAG CGCTGCTCGG CGCGCCCGAC
ATCAATACGG CTTTGGGCCT GCGCGATCGC ACGATGCTGG AGTTGATGTA CGCGAGCGGC
TTGCGCGTAA CTGAACTCGT CACGTTGAAG ACGGTGGAAG TCGGCCTGAA CGAAGGCGTG
GTGCGTGTCA TGGGCAAGGG TTCGAAGGAG CGGCTGATTC CATTTGGCGA AGAGGCGCAT
AGCTGGATCG AGCGCTATCT GCGCGAAGCG CGGCCCGCGT TGCTCGGCGC GCGCGCGACC
GACGCGCTGT TCGTGACGAA CCGCGCCGAA GGCATGACGC GCCAGCAGTT CTGGAACATC
ATCAAGCGTC ACGCCGTGGT GGCCGGCGTG CATGCGCCGC TCTCGCCGCA TACCTTGCGG
CATGCGTTCG CCACGCATCT GCTCAATCAC GGCGCCGACC TGCGCGTCGT GCAACTGCTG
CTCGGGCACA CGGATATTTC GACCACGCAG ATCTACACGC ACGTGGCGCG GGAGCGGTTG
AAGTCGCTGC ATGCGCAGCA TCATCCGCGA GGTTGA
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| Protein sequence | MSDTLIDDAA TASPLFVASS ASIDAFCDAL WLEHGLSRNT LDAYRRDLRL FCEWLAQSRN
ASLDTASEAD LNAYSAARRK DKSTSANRRL SVFRRYYGWA VREHRTKVDP TVRIRSAKQP
PRFPSTLSEA QVEALLGAPD INTALGLRDR TMLELMYASG LRVTELVTLK TVEVGLNEGV
VRVMGKGSKE RLIPFGEEAH SWIERYLREA RPALLGARAT DALFVTNRAE GMTRQQFWNI
IKRHAVVAGV HAPLSPHTLR HAFATHLLNH GADLRVVQLL LGHTDISTTQ IYTHVARERL
KSLHAQHHPR G
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