| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3200 |
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| Symbol | |
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| ID | 6281252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3607779 |
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| End bp | 3608537 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622774 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001896816 |
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| Protein GI | 187925174 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0454791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGATTC GTGACAACGT TTTCCTGATC ACCGGCGGTG CATCGGGACT GGGCGCAGCC
ACGGCACGGC TGTTCGTCGA AAACGGCGGC AAAGTGGTGC TCGCCGACCT GAACGTGGAT
GCCGGCGAAG CGCTCGCCAA GGAACTCGGC GGTGTGTTCG TCAGATGCGA CGTGAGCCGC
GAAGACGACG CCACCCAGGC CGTTGAAGCC GCCACCAAGC TCGGCACGCT GCGCGGTCTG
GTCAATTGTG CGGGCGTCGC GCCGGCCGTC AAAACAGTCG GCAAGGACGG CCCCCATCCG
CTCGACGCGT TCGCGCGCAC CATCTCGATC AATCTGATCG GCACCTTCAA CATGGTCCGG
CTCGCCGCCG CGGCCATGTC GAAGAACGAG CCGAACGCGA ATGGCGAGCG CGGCGTGATC
ATCAACACGG CGTCGGTGGC CGCGTTTGAC GGTCAGATCG GCCAGGCGGC TTATGCGGCA
TCCAAGGCCG GCGTGGCCGG CATGACGCTG CCCATCGCTC GCGACCTTTC GCGCAACGCG
ATCCGCGTGA TGACGATCGC ACCGGGCATT TTCGAAACGC CCATGCTGCT CGGCATGCCG
CAGGAAGTGC AAGACGCCCT TGGCGCGATG GTGCCGTTCC CGCCGCGTCT CGGCAAACCG
GTCGAATACG CGATGCTGGC CAAGCAGATC TTCGACAATC CGATGCTCAA CGGCGAAGTG
ATTCGTCTGG ACGGCGCGAT CCGGATGCAG CCGAAGTAA
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| Protein sequence | MEIRDNVFLI TGGASGLGAA TARLFVENGG KVVLADLNVD AGEALAKELG GVFVRCDVSR
EDDATQAVEA ATKLGTLRGL VNCAGVAPAV KTVGKDGPHP LDAFARTISI NLIGTFNMVR
LAAAAMSKNE PNANGERGVI INTASVAAFD GQIGQAAYAA SKAGVAGMTL PIARDLSRNA
IRVMTIAPGI FETPMLLGMP QEVQDALGAM VPFPPRLGKP VEYAMLAKQI FDNPMLNGEV
IRLDGAIRMQ PK
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