Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3198 |
Symbol | |
ID | 6281125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3605833 |
End bp | 3606633 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642622772 |
Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
Protein accession | YP_001896814 |
Protein GI | 187925172 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.288569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACC CCAACACCGC CACTCCCCCG TTTATCGCCG TCGTGCCGGC CCGGCTCGCT TCGACGCGTC TGCCCAACAA GCCGCTCGCC GACATCGGCG GCAAGCCGAT GGTGGTGCGG GTCGCCGAAC GCGCGCGCGA ATCGGGCGCG CAGCAGGTGC TGGTCGCCTC GGACGCGCAA GCGGTGCTCG ACGCCGCCCG CGATCACGGC TTCGAAGCCG TGTTGACGCG CGCGGACCAT CCGTCGGGCA CGGACCGTCT CGCGGAAGTC GCGGCGCAGT TCGGCTGGAG CGACGACACG ATTGTGGTCA ACGTGCAGGG CGACGAACCG CTGATCGATC CAGCGCTCGT GTGCGGCGTT GCGTCGCACC TTGCGGCAAG CCACGGCTGC GCGATCGCCA CCGCTGCGCA TCCGATCACC GACCCCGCTG AAATTTTCAA CCCGAACGTC GTCAAGGTCG TACTCGACGC GCGCGGCGTA GCGCTGTATT TTTCGCGCGC GCCGATTCCG TGGGCACGCG ACGCCTACCA GCCGCACTGG CCGAATGTCG CGTCGATGCC CGCACCTCAT GCGCCCGCGG TGGTTCATCG GCATATCGGG CTGTACGCCT ATCGCGCGCA ATTCCTGCGC ACGTACCCCA GCCTCGCGAT TTCGCCGATC GAACAGGTCG AAGCGCTCGA ACAATTGCGC GCGATGTGGC ACGGCGAGCG GATCGCCGTG CTCGTCACGC ACGAGGTGCC GCTGCCCGGT GTGGACACAC CCGCCGATCT CGCGCGCGTG CAGGCTTTAT TCGGGTCTTG A
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Protein sequence | MTHPNTATPP FIAVVPARLA STRLPNKPLA DIGGKPMVVR VAERARESGA QQVLVASDAQ AVLDAARDHG FEAVLTRADH PSGTDRLAEV AAQFGWSDDT IVVNVQGDEP LIDPALVCGV ASHLAASHGC AIATAAHPIT DPAEIFNPNV VKVVLDARGV ALYFSRAPIP WARDAYQPHW PNVASMPAPH APAVVHRHIG LYAYRAQFLR TYPSLAISPI EQVEALEQLR AMWHGERIAV LVTHEVPLPG VDTPADLARV QALFGS
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