| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3195 |
|---|
| Symbol | xseA |
|---|
| ID | 6281122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3602537 |
|---|
| End bp | 3603916 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642622769 |
|---|
| Product | exodeoxyribonuclease VII large subunit |
|---|
| Protein accession | YP_001896811 |
|---|
| Protein GI | 187925169 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1570] Exonuclease VII, large subunit |
|---|
| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.300243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.30831 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCG AAAGCCCTTT TTTCTCGTCG GCTGCGCCCG GCGGTGAAGT CGTCGTTCCC
GTTTCGGCGC TCAATCGCGC GATCGGCACG ATGCTCGAAC GTTCGTTTCC TCTCGTCTGG
GTTGCCGGCG AAGTGTCGAA CTTCACGCGC GCCGCGAGCG GTCATTGGTA TTTCTCGATC
AAGGACGCGC AAGCGCAGAT GCGCTGCGTG ATGTTCCGCG GACGCGCTCA ATACGCCGAA
TTCACCCCGC GCGAGGGCGA CCGCATCGAA GTGCGCGCGC TGGTGACGAT GTACGAGCCG
CGCGGCGAAC TGCAACTGAA TGTGGAAGCG GTGCGGCGCA CCGGACAAGG GCGGCTCTAC
GAAGCGTTCC TCCGGTTGAA AGCGCAGCTC GAAGCCGAGG GTCTCTTTGC CGCCGAACGC
AAACGCGCGC TGCCGTCGCA CCCGCGTTCT ATCGGCATCG TCACGTCGTT GCAGGCCGCG
GCGTTGCGCG ACGTCCTGAC CACGCTGTCG CGGCGCGCCC CGCACATTCC GGTGATCGTC
TATCCGGCGC CGGTGCAGGG CGTCGGCGTG AGCAGCAAGC TCGCGGCGAT GGTCGACGCC
GCCAACGCAA GGCGCGAGGT CGACGTGCTG ATCGTGTGCC GCGGCGGCGG CTCGATCGAA
GACCTGTGGG CGTTCAACGA AGAAGTGCTG GCGCGCGCGA TCGCGGAAAG CGCGATTCCC
GTGGTGAGCG GCGTGGGCCA CGAAACCGAT TTCACGATCG CCGATTTCGC CGCGGACGTG
CGCGCGCCGA CACCGACCGG CGCCGCCGAA CTCGTCAGTC CGCAGCGCGT GCTGCTGTTG
CGCGAACTGG ACCAGCGTCA CGCGACGCTC GCGCGCGGTT TCGGCCGCAT GATGGAGCGG
CGTGCCCAGC AACTCGACTG GCTCGCGCGC CGGCTGGTGT CGCCGGCCGA GCGGCTTGCG
CGGCAACGCA CGCATTTGCA GCAATTGAGC GTGCGGCTCG CCTCGGCGGG CGCGCGTCCG
GCGCGTGACG CGCGAGCGCG GTTTTCGCTG CTGCAGATGC GCTGGCAGCG CTGGCGTCCG
GATCTCGCCG GGCATCAGGT GAAACTCGGC AATCTCTCGC AACGCTTGGA CGCAGCTTTA
TTACGTCAGC ATGAACGTCA GACCGCGCGC ATCGACACGC TTGCCGCACG TCTCGAAGTG
CTGAGTCCGC AGCGTACGCT CGAGCGTGGC TATGCAGCGG TGCTTGACGC CCAGAGCGGG
CGAGCGGTGC GCGCGCCGTC GTCGTTGAAG CCGGGGCGGC GTCTCACGGT GCATCTCGCG
GAGGGCGCCG CGGACATCGC GCTGGCCGAT GTGCAAGCAC GTCTGACCGA CGGTTTCTGA
|
|---|
| Protein sequence | MNPESPFFSS AAPGGEVVVP VSALNRAIGT MLERSFPLVW VAGEVSNFTR AASGHWYFSI
KDAQAQMRCV MFRGRAQYAE FTPREGDRIE VRALVTMYEP RGELQLNVEA VRRTGQGRLY
EAFLRLKAQL EAEGLFAAER KRALPSHPRS IGIVTSLQAA ALRDVLTTLS RRAPHIPVIV
YPAPVQGVGV SSKLAAMVDA ANARREVDVL IVCRGGGSIE DLWAFNEEVL ARAIAESAIP
VVSGVGHETD FTIADFAADV RAPTPTGAAE LVSPQRVLLL RELDQRHATL ARGFGRMMER
RAQQLDWLAR RLVSPAERLA RQRTHLQQLS VRLASAGARP ARDARARFSL LQMRWQRWRP
DLAGHQVKLG NLSQRLDAAL LRQHERQTAR IDTLAARLEV LSPQRTLERG YAAVLDAQSG
RAVRAPSSLK PGRRLTVHLA EGAADIALAD VQARLTDGF
|
|---|
| |