| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3189 |
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| Symbol | |
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| ID | 6281273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3595002 |
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| End bp | 3595988 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642622763 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001896805 |
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| Protein GI | 187925163 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.129665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.105158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAC AAGGAATCGA CAAGGCATCC AGCTTCGAGG CCGCGCGCGC ACGCCTGCTT
GCGCTGGCGT ACCGGATGCT CGGCAGCCGC GCCGAAGCGG AAGACGTGGT GCAGGACGTG
GGATTGAAAT GGCACCTCGC GGACACGCAG GAACTGCAGG TACCCGCCGC CTGGCTCACC
ACGATCACCA CGCGGGTGGC GATCGACAGG TTACGGCGTG TGCAGCGCGA ACGCGCCTCG
CAGGCCGCCG GCTGGTTGCC GGAGTTGTGG CTCGACGAGG TGGCGCCATC GGCGGAAGAA
CTGGCCTTGC GCGCGGCGGA GATGTCCTAT GGCGTGATGC TGCTGCTCGA GCGCCTGAAG
CCGGACGAAC GGGCCGCGTT CGTGCTGCAC GAAGCCTTTG ATTGCGACTA CGCGGAAATC
GCCGCCATAC TGGAGCGAAC GCCGGCGGCC TGCCGGCAGA TCGTCCATCG GGCCAAGGCG
CGCGTGCAAC GCGCGGGTGC GCCGATCGAG CCGCCGGATC CCGCCGCGCA TGCGCGGATC
GTGGAGCGCT TGCGCACGGT GCTGGAGGCG CAAGATCGGG TCGGTCTATT GCAGCTCTTC
AGTGACGCGC CAGAAGTGGT CAGCGACGCG CCTGTGTGCG CAGCTGTGAG CAGGTGCGAA
CCGGCGGCGG CAGGGTGGAT GGACGCGGTA ACGTCGCTCG TCGAGCACGC GAGCAACGCG
GAGACAGTGT CGGTGGCGGG CACATTGTGT ATCGCCTTGC TCTTCGAGGG AGACGTCGTC
GGGGTGCTCG ACGTCTCCAC GAACAACTTG GGAGATGGCT CGACGAAGAT CGTCTCCATG
CGCGTGGTGA CGAGCACGGC GCGTCTGCAG GCCACCAACA GCATGCTGGG CCGTGCGGCG
GTCAGGCAAC TGCTTGCGCG GATCCAGCAG CGCGCTATGA GCTCAGTTGC GGTGGGCGGC
GACTTCCCAG TTGATGTCTA CGCATAG
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| Protein sequence | MTEQGIDKAS SFEAARARLL ALAYRMLGSR AEAEDVVQDV GLKWHLADTQ ELQVPAAWLT
TITTRVAIDR LRRVQRERAS QAAGWLPELW LDEVAPSAEE LALRAAEMSY GVMLLLERLK
PDERAAFVLH EAFDCDYAEI AAILERTPAA CRQIVHRAKA RVQRAGAPIE PPDPAAHARI
VERLRTVLEA QDRVGLLQLF SDAPEVVSDA PVCAAVSRCE PAAAGWMDAV TSLVEHASNA
ETVSVAGTLC IALLFEGDVV GVLDVSTNNL GDGSTKIVSM RVVTSTARLQ ATNSMLGRAA
VRQLLARIQQ RAMSSVAVGG DFPVDVYA
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