| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3188 |
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| Symbol | |
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| ID | 6281272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3593736 |
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| End bp | 3595046 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622762 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001896804 |
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| Protein GI | 187925162 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.338182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.117578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCGC GCAGCCACCT CCACACGACT GACATGATGA GCATGATCGA CCTCGATCCT
CCCGGCTTCC AGCCGCCGCG CCCAATGGCC GGCGACGAAG GCTCCCGGCG CACCGTTCTG
TACGGCGGCT ACACCGTTTT CAGCGTGTTC CAGCCAGTTT TCTCCGTATC GCACCGGCGC
GCGATCGGTT ATCACGCGTC GCTGCGCGCC CACGATGAAC ACGCGCTGCA AGTGCCGTCC
CACGAGGTTT TCACGCAAGC CGCGCGACGC GGCGACCTGC TCGAACTCGG ACGGCTCGCC
GAATCGCTGC ATCTCGGCAA CTTCAACGCG TTCGACAGTC ACGACGAATG GCTCTTCCTG
AGTCTGCACC CCGCCGCGCT GATGGACACC AGTTACGGCG ACGCGCTGCT CGCAGGCCTT
AAGGCGCTCG GCCTGCCGCC GCAGCGCGTG GTGCTCGAAG TGTCCGAACA GGCGGGCGGC
GAAACGACGC GCTTTGCCGA AATCGTCGAC GCGTTGCGTA AGTCCGGCTT CCTGATCGCG
CTCGACGGCT TTGGCGCGAA ACATTCGAAC ATTGACCGCG TGTGGAATCT GCGGCCGGAC
ATCGTCACGC TCGACCGCTG CATTCTCGCG CAAGCCAGCG AGCATTCGCA CATTGAGCGT
GTGTTGCCGG GCCTCGTCTC GCTGCTGCAC GAGTCCGGCC AGCTGGTGCT GATGGGCGGC
CTGAGCACCG AACGCGATGC ACTGATCGCG CTCGAATGCA ACGTGGACTT CGTGCAAGGC
GCCTTCTTCG CGGGCCCGAG CGTCGAACCG GTCAAGCCGC AAGCGGCGGC CGGTTTGATG
GACTCGCTCT CCGCGGCGCT GCGCGAACGG GTCACCGCGC GTGAACACGC ACAATCGGCG
CGGCTCGCAC CGTATGTCAC GGCCCTCGAA ACGGCTGCCG CACAACTGGT GGCCGGCGAG
TCCGTTGCGC AAGCCACTGC GCCGCTCCTG ATGCTCGGCG AGACGGCACG CTGCTTCGTG
CTCGACGGCT CGGGCCGGCA GATCGGCGAC AACGTGCTCC CGCCGGGGCG CGCCTCGCAA
CGCGCCAAGC GTTTCCGCCC GCTTCTGCAT TCGGAAGGCG CCAGTTGGGA ACGCCGGCCG
TACTTTATTC AGGCGATGCG CACGCCCGGC CACGTGCATC TCACCCCGCC TTATCTGTCC
ATCAACGAAG CGCATCTGTG CGTGACTGCC TCGATCGCCG CGCACACACC GACGGGCACG
CAAGTGCTAT GCGTAGACAT CAACTGGGAA GTCGCCGCCC ACCGCAACTG A
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| Protein sequence | MQARSHLHTT DMMSMIDLDP PGFQPPRPMA GDEGSRRTVL YGGYTVFSVF QPVFSVSHRR
AIGYHASLRA HDEHALQVPS HEVFTQAARR GDLLELGRLA ESLHLGNFNA FDSHDEWLFL
SLHPAALMDT SYGDALLAGL KALGLPPQRV VLEVSEQAGG ETTRFAEIVD ALRKSGFLIA
LDGFGAKHSN IDRVWNLRPD IVTLDRCILA QASEHSHIER VLPGLVSLLH ESGQLVLMGG
LSTERDALIA LECNVDFVQG AFFAGPSVEP VKPQAAAGLM DSLSAALRER VTAREHAQSA
RLAPYVTALE TAAAQLVAGE SVAQATAPLL MLGETARCFV LDGSGRQIGD NVLPPGRASQ
RAKRFRPLLH SEGASWERRP YFIQAMRTPG HVHLTPPYLS INEAHLCVTA SIAAHTPTGT
QVLCVDINWE VAAHRN
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