| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3186 |
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| Symbol | |
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| ID | 6281270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3590567 |
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| End bp | 3591985 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622760 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001896802 |
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| Protein GI | 187925160 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.262075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0345123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACTCG AAATCCAGCT CGATCGGGAC AACGGCGTGC CGCTGACCGA ACAGATCGTC
ACCGGCGTCA CGGCGTGGAT CCGCTCGCGC ATCGCCCACC CCGGCTCGAA GCTTCCGTCG
ATTCGCCAGT TTTCCGCCGA CTACGGTGTG AGCCGCTTTC CGGTGATCGA GGCGTACGAC
CGGCTGGTGT CGCTCGGCTA CGTCGACTCG CGCCACGGCT CCGGTTTTTA TGTCGCCGAT
CGCCAACCGG CGGGCACGCA GTGCCAGGGC ACTTCGGATC CGCGCCGCGC CGAGGACGAG
TCGGACCATC TGTTGCAGCA GTTCAACCAT CCGGGCGAGA CGCTCAAGCT CGGCAGCGGC
TTTATTCCTG AAGCGTGGCG CGACACGGAC AGCATTGCGC AGGCAATCCG CCACGTGTCG
CGCACCGATC TCGCGAGCAT GGTCGATTAC GCCACCCCGC TCGGCAACCT GACGTTGCGC
GAACATCTGC AGAGCCGCAT CGGCCAGTTG GGGATTCAGG CTGACACGTC GCAAATCCTC
ATCACCAACG GCGCAAGCCA GGCGCTCGAT CTGCTGATGC GCTACATGCT CAAGGCAGGC
GACACGATCT TTGTCGAAGA CCCCGGTTAC TACAACCTCC ACGGTCTGCT GAAGCTGCAC
GGCGTGAAAC TGGTCGGCAT TCCGCGCACA CGCAACGGTC CCGATCTGGA CGTGATGCAG
GAGCAGTTGA AGTCGCATCG GCCCAAGCTG CTGTTCATCA ACACCGTGTT CCACAATCCG
ACGGGCACCA ACGTGGCGCC GCCGGTGGCC TTCCGGCTAC TGCAGCTCGC GCGCGAGCAC
GGCTTCTCGA TCATCGAAGA CGATATCTAC GCCGATTTTC AGACCGACCT CACCGATCGG
CTCGCCACGC TCGACCAGCT CGAACACGTG ATCTACGTGG GCGGACTGTC GAAGACGTTG
TCGTCGTCGC TGCGGATTGG CTGTGTGGTG GCGAGCCACG CGATCATCAA GGATCTGGTC
GACATCAAGA TGCTGACGAG CATCGGCGGC TCGCGTTTTG CCGAAGCGGT CGCCGTGGCG
ATGCTGGAGC GCGGCGCGTA TCGCAAGTAT CTGGAGCGTC TGCGTCGGCG TATGCGCGAC
GCGCTCGGCT CGACCATCCA AACGCTCGAA GACGCGGGCT GGGAAATTTT CGACAAGCCC
GTGGGCGGAA AATTCGTGTG GGCTCGCGTG CCGCATGTCG CCAATGCGGA ACGGCTGGTG
GAGTGCGGCG TGCCGCTGGG GGTGACCGTC GTGCCGGGCA ATCACTTCCG GCCGAATATG
GAAGTGAGCC CGTGGACCCG AATTCATATC GCATTCGGTA ACGACCCGCG TGCGCAGGCG
TTCTTTCACG CGGCGGCGGC GCTGCCGGCG TCGGAGTGA
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| Protein sequence | MKLEIQLDRD NGVPLTEQIV TGVTAWIRSR IAHPGSKLPS IRQFSADYGV SRFPVIEAYD
RLVSLGYVDS RHGSGFYVAD RQPAGTQCQG TSDPRRAEDE SDHLLQQFNH PGETLKLGSG
FIPEAWRDTD SIAQAIRHVS RTDLASMVDY ATPLGNLTLR EHLQSRIGQL GIQADTSQIL
ITNGASQALD LLMRYMLKAG DTIFVEDPGY YNLHGLLKLH GVKLVGIPRT RNGPDLDVMQ
EQLKSHRPKL LFINTVFHNP TGTNVAPPVA FRLLQLAREH GFSIIEDDIY ADFQTDLTDR
LATLDQLEHV IYVGGLSKTL SSSLRIGCVV ASHAIIKDLV DIKMLTSIGG SRFAEAVAVA
MLERGAYRKY LERLRRRMRD ALGSTIQTLE DAGWEIFDKP VGGKFVWARV PHVANAERLV
ECGVPLGVTV VPGNHFRPNM EVSPWTRIHI AFGNDPRAQA FFHAAAALPA SE
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