| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3183 |
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| Symbol | |
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| ID | 6282456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3587276 |
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| End bp | 3588676 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642622757 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001896799 |
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| Protein GI | 187925157 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.679895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0141006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACA TGACACCTGA ACTCGCTCTC AAACATATCT GGACGCTGGC CGGATGTGAT
CCGACCGCGC TGCATTCCGT GACGCTGACG GGCGCTGATC CGGGCTTGCC GTCGGTCTAC
CGGGTCGGCA GCCTGGCCTC GGCGAGCATC GCCGCGACCG GTCTTGCCGC GGCCGAATAT
CAGCGTTTGC GCACCGGGCA CCGGCAGCAC GTGACGGTGG AGATGCGGCG CGCGCTGGCC
TCGTTTCGCA GCGAGCGCTA TCTGCGTGTC GACGATGGGC CGCCGCCCGC CTTGCGCGAT
CCGGTCACGG GTTTCTACGA GACACGCGAT GGCCGCTGGA TTCAACTGCA TACGAACTTC
GCGCATCATC TTCGGGGCGT ATTGCAGGTG CTCGGCTGCG AGAACGATCC TGCTGCCGTG
GCCGCCGCGA TTCGCAACTG GGACGGCGCG ACGCTCGATC AAACCCTCGC TGACGCCGGC
CTCTGCGCGG CGTTGATTCG CACGCCCGAC GAGTGGGCCG CGCTCGATCA GGCGAAAGCG
ATCAGGGGCT TGCCGCTCTT CGAGATCGAG CGCATCGGCG ACGCGCCGGC CGAGCCGCCG
CGTGCGTCCG ACGCGGATCG GACGCTGACG GGCGTGCGGG TGCTGGATTT GTCGCGCATC
ATTGCCGGTC CAGTGGCCGG GCGGGCGCTC GCGCAGCATG GTGCCGACGT GCTGATGATC
AACGGGCCGC ATCTGCCGAA CATCGCGCCT CTGGTGATCG ACAACGGGCG TGGCAAGCGC
TCGGCTCTTG TCGATCTGCG CGACGCGGCG GGGCGTGAGG TGTTGCGCGG CCTCGCCGCC
GACGCCGATG TATTTCTGCA GGCCTATCGC CCGGGAGCGC TGGCCGCGCG CGGTTTCGGT
CCGGAGGAAC TGGCGCGTGC GCGGCCGGGG ATCGTCTATG TCTCAGTGTC GGCTTATGGG
CATCAGGGGC CGTGGGCACA ACGACGCGGG TTCGATAGCC TGGTGCAGTC GGCGAGCGGG
ATTGCCTTCA CTGAGCGGCA GGCGGCGGGG TGGAACGAGC CCAAGCATTT GCCTTGTCAG
GCGCTGGATC ATGCGACCGG GTATCTCGCG GCATTCGGCG CGATGGTCGC ATTGGCGCGG
CGGGCTACCG AAGGCGGAAG CTGGCATGTC CGCGTCTCGC TCGCGCAAAC CGGCCGGTGG
TTGCAATCGC TAGGGCAGAT CGCCGATGGC TGGCAAGCGC ACGACGTCAC GCTCGACGAT
GTGCGCGATT GCCTCACGAC CGTGGAGTCG GAGTTTGGAC GCGTGCTAGG CGTGCAGCCG
GCTGAGGTTC TGGACGAGAC GCCTGCATAC TTCGCGCTGC CGCCGGCCCG AATAGGCGCC
CATGAGGCTA AGTGGGCGTG A
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| Protein sequence | MDDMTPELAL KHIWTLAGCD PTALHSVTLT GADPGLPSVY RVGSLASASI AATGLAAAEY
QRLRTGHRQH VTVEMRRALA SFRSERYLRV DDGPPPALRD PVTGFYETRD GRWIQLHTNF
AHHLRGVLQV LGCENDPAAV AAAIRNWDGA TLDQTLADAG LCAALIRTPD EWAALDQAKA
IRGLPLFEIE RIGDAPAEPP RASDADRTLT GVRVLDLSRI IAGPVAGRAL AQHGADVLMI
NGPHLPNIAP LVIDNGRGKR SALVDLRDAA GREVLRGLAA DADVFLQAYR PGALAARGFG
PEELARARPG IVYVSVSAYG HQGPWAQRRG FDSLVQSASG IAFTERQAAG WNEPKHLPCQ
ALDHATGYLA AFGAMVALAR RATEGGSWHV RVSLAQTGRW LQSLGQIADG WQAHDVTLDD
VRDCLTTVES EFGRVLGVQP AEVLDETPAY FALPPARIGA HEAKWA
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