| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3177 |
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| Symbol | |
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| ID | 6281504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3580210 |
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| End bp | 3581076 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622751 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001896793 |
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| Protein GI | 187925151 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.836901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000740556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCACCA TCGTTCCGCC GACGCCGCGC GCGGCTGCCG AGCCACGCTT CGACGAGTTG
CGCCTGCTGC TGCGCTCGCC GACTTTCGTG GTGGGCATGG TGATCGTCAC ATGGTGGATC
GTCTGTGCGA TTGCCGGGCA ATGGATCGTG CGCATCGATC CGTACGCCTC CGATCCGCTC
AATTCGCTAA CGCCGCCCGA CAGCACGCAT TGGTTCGGCA CCGATCAACT CGGGCGCGAC
GTGTTCTCGC GCGTGATCGT CGGTGCGCGC GACATTCTCA CCATCGCGCC GCTTGCGACC
TTGCTCGGCA CGATCGCGGG TACCACGCTG GGCTTGATCG TCGGCTACTT CGAAGGCTGG
GTGGACAACG TGGTCGGACG CGCGATCGAC GCTGTGCTCG CGCTGCCGCT CGTGATCGTC
GCGCTGCTCG CGCTCGCCGC GGTCGGTGCG TCGAACTTCA CCGTCATCCT CGTGATCGGC
ATCACGTTCA CACCGATTAC CGCGCGCACC GTACGCGCCG CCGTGTTCGC CGAGCGGCAT
CTCGACTACG TCGCCGCGGC GCAGCTGCGC GGCGAACGCG CACCCTACAT CATGTTCGCC
GAGATTCTGC CGAACGTGTT GCCGCCGATC ATCGTCGAAG CGACGGTGCG GCTCGGCTAC
GCGATCTTCG CGGTCGCCAC GCTGTCGTTT CTCGGCTTCG GCATTCAGCC GCCGTCGGCG
GATTGGGGCC TCGCACTCTC CGAGTCGTAC ACGCTGATGG CGGGCGGCGC ATGGTGGACC
GTGGTGTTCG CGGCCGGCGC GATCGCGAGT CTCGTGGTCG GTGTGAATCT GATCGCCGAC
AGCGTGCAAG GCGTGCTCGA CCGATGA
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| Protein sequence | MSTIVPPTPR AAAEPRFDEL RLLLRSPTFV VGMVIVTWWI VCAIAGQWIV RIDPYASDPL
NSLTPPDSTH WFGTDQLGRD VFSRVIVGAR DILTIAPLAT LLGTIAGTTL GLIVGYFEGW
VDNVVGRAID AVLALPLVIV ALLALAAVGA SNFTVILVIG ITFTPITART VRAAVFAERH
LDYVAAAQLR GERAPYIMFA EILPNVLPPI IVEATVRLGY AIFAVATLSF LGFGIQPPSA
DWGLALSESY TLMAGGAWWT VVFAAGAIAS LVVGVNLIAD SVQGVLDR
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