| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3176 |
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| Symbol | |
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| ID | 6281503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3579203 |
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| End bp | 3580213 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622750 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001896792 |
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| Protein GI | 187925150 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000749118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGACCA CGGTGAGCCC TTCCGCTTCT TCTGCGCCGA GCGGCAACGC GGGCCGTGTC
GTGCGTTTTC TGGCGACGCG TGTGGGCTTG TCGCTAATCA CGCTGTGGCT GCTGTCGGTG
ATCGTGTTCG CGGGCGGACA ACTTCTGCCC GGCGACATCG GCCGCGCGGT GCTCGGCCCG
CTGGCCGATG CGCGCGCGGT TGCCGCGCTC AATCATCAGC TCGGCGCGGA CCGTCCGCTG
ATGACGCAAT ACGTCGACTG GATCTCGCAT TTCGTGCGTG GCGATATGGG GCTGTCCTAC
GCGTATCGCG AGCCGGTGCG GCCGTTTATC GCCGAGGCGC TCGCGCATTC CGCCAAGCTC
GGCTTGCTGG CGTTCATCGT GGTCGTGCCG CTCGGCATTG CGGGCGGCGT GTGGTCGGCC
ATGCACGCGG GACGCTGGCT CGATCGCACG ATCAGCATCG CGGGACTATC GGCGACAGTC
GTGCCGGAAT TCGTTTCGTC GATCGTGCTG ATTCTGGTGT TCGGCGTGTG GTTGCGCTGG
CTGCCGATCG AAGCGTCGTA TCCGCCCGAA GCGGGCGCGC TCGAACAATT GCGTCATCTG
GTGCTGCCGG TCCTGCCGCT CGTGCTTGTG TTCTTCGGCT ATATCGCTCG CATGGCGCGT
GCGGGGACCG TCGAGGCGCT CGATGCCGAC TACACGCGCA CCGCGATTCT CAAAGGCTTG
CCGCGTCATA TCGTGATCTG GCGGCATGTG CTGCGCAATG CATTGCTGCC CACCATCACG
GTCGCCGCCA CGCAACTCGG CTATATGATC GGCGGCCTCG TGGTGGTCGA GACGCTGTTC
CACTATCAAG GTATCGGCTC GCTGATCTAC AACGCGGCCA AGGCCAAGGA CTTTCCGATG
CTCGAAGCAG GCGTGCTGAC CATCGGCGTG GTCTACACCG TCGCCAATCT CGTCGCCGAT
GCGCTGCATG TGCTGCTCAA TCCGCGGCTG CGGGTGAGGA GCGCCGAATG A
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| Protein sequence | MSTTVSPSAS SAPSGNAGRV VRFLATRVGL SLITLWLLSV IVFAGGQLLP GDIGRAVLGP
LADARAVAAL NHQLGADRPL MTQYVDWISH FVRGDMGLSY AYREPVRPFI AEALAHSAKL
GLLAFIVVVP LGIAGGVWSA MHAGRWLDRT ISIAGLSATV VPEFVSSIVL ILVFGVWLRW
LPIEASYPPE AGALEQLRHL VLPVLPLVLV FFGYIARMAR AGTVEALDAD YTRTAILKGL
PRHIVIWRHV LRNALLPTIT VAATQLGYMI GGLVVVETLF HYQGIGSLIY NAAKAKDFPM
LEAGVLTIGV VYTVANLVAD ALHVLLNPRL RVRSAE
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