| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3170 |
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| Symbol | |
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| ID | 6282569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3571127 |
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| End bp | 3571696 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622744 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001896786 |
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| Protein GI | 187925144 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0157507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00975609 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACCTTC TCGCTCTGAA CAAACCGTTC GGCACCATCT GTCAGTTCTC GCCCCACGAG
ACGCGCGCGT CGCTGGCCGA CTGGGTCAAG GTGCCCGACG TGTACCCCGC GGGCCGGCTC
GACTCCGACA GCGAAGGCCT GCTGCTTCTC ACCGACGACG GCGCATTGCA AGCGCGTATC
GCCGAGCCGC GTCACAAGCT GGTCAAACGT TACTGGGCGC AAGTGGAAGG CGCCGTCGAT
GCGGCCACGC TGAAAAAGCT TGCGCGCGGC GTCGATCTCG GCGACTACGT GACGCGGCCT
TGCCGCGCGG AATATGTCGA GCCGACGGAC GCGCTCTGGA CACGCACGCC GCCGATCCGT
TTCCGCGCCG CGATACCGAC CACATGGATC GAGCTATCGA TCACCGAAGG CAAGAACCGC
CAGGTGCGTC GCATGACTGC CGCGGTGGGG TTCCCGACGC TGCGCTTAGT ACGTGTCGGC
ATCGGCGCGC TCGACATTTT TTCGCTGGGG CTGCAACCGG GAGAGAGCGT CGAATTGTCA
CCGAAGGCGC CGTGGGAAGG CATCGCCTGA
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| Protein sequence | MHLLALNKPF GTICQFSPHE TRASLADWVK VPDVYPAGRL DSDSEGLLLL TDDGALQARI
AEPRHKLVKR YWAQVEGAVD AATLKKLARG VDLGDYVTRP CRAEYVEPTD ALWTRTPPIR
FRAAIPTTWI ELSITEGKNR QVRRMTAAVG FPTLRLVRVG IGALDIFSLG LQPGESVELS
PKAPWEGIA
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