| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3160 |
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| Symbol | lspA |
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| ID | 6280859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3558501 |
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| End bp | 3559019 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622734 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001896776 |
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| Protein GI | 187925134 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.366988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0125166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGAA CCATGTCGAA AACCGCGCCA AAAACATCTG CTGCAAACGG GTCGCTGGCG
CCCTGGCTGG GCGTCGCACT GATCGTCATC CTGTTCGATC AGTTGACGAA AATCGCGGTG
CAGAAAGTGT TCGCCTACGG TGTCGCGCAT GAGGTCACGT CGTTTTTCAA CCTGATCCTC
GTGTACAACC GCGGCGCGGC ATTCAGCTTC CTCGCCATGG CGGGCGGCTG GCAACGCTGG
GCGTTCACCG CGCTCGGCGT GGTGGCCGCG CTCGTGATCT GCTATCTGCT CAAGCGTCAC
GGCGGGCAGA AAATGTTCTG CACGGCGCTC GCGCTGATTC TCGGCGGCGC GCTCGGCAAC
GTGATCGACC GGCTCGCGTA TGGCCACGTG ATCGACTTCC TCGATTTCCA CCTGCGCACG
TGGCACTGGC CGGCGTTCAA TCTCGCCGAC AGCGCGATTA CGGTCGGCGC GGTGCTGCTG
GTGCTCGACG AGTTGCGCCG CGTGCGCGGT TCGCGCTAA
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| Protein sequence | MARTMSKTAP KTSAANGSLA PWLGVALIVI LFDQLTKIAV QKVFAYGVAH EVTSFFNLIL
VYNRGAAFSF LAMAGGWQRW AFTALGVVAA LVICYLLKRH GGQKMFCTAL ALILGGALGN
VIDRLAYGHV IDFLDFHLRT WHWPAFNLAD SAITVGAVLL VLDELRRVRG SR
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