Gene Bphyt_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3157 
Symbol 
ID6283686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3553725 
End bp3554378 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID642622731 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_001896773 
Protein GI187925131 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0409852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0214096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TCGTCATCCT GATTTCCGGA CGGGGAAGCA ACATGGAAGC CATCGTTCGA 
GCGTGCTCGA ACGAGGCCTG GCCGGCGCGA GTCGCCGCCG TGATTGCCAA CCGTCCCGAC
GCCGCGGGCC TTGCGTTCGC GGCGTCGCAC GGCATTGCCA CGGCGGTGGT CGACCACCGC
CAGTTTCCTG ACCGCGACAG CTTCGACGCC GCGCTCGCCA AAGAAATCGA TAGTTTCGCG
CCCGACCTGG TGGTGCTCGC TGGATTCATG CGGGTGCTGA CAGCCGGTTT CGTCGATCAT
TACGCCGGGC GCATGCTGAA CGTGCATCCG TCCCTGCTGC CGAGCTTTCC GGGCCTGAAA
ACCCATCAGC AGGCGCTCGA CGCGGGCGTG CGGCTGCACG GCGCGTCCGT GCATTTTGTC
ACCTCGCAGC TCGATCACGG GCCGATCGTC GCGCAAGCGG CGGTTCCCGT CGAAACAGGC
GACACCCCCG CCATGCTCGC CGAACGCGTG CTGGCAACCG AACACATTAT TTATCCACGC
GCGGTGCGCT GGTTCGTCGA AGGGCGTCTT GCTCTGGATG GCCTGCGTGT CACGCTTACG
CCGCCGGAGC CGCAATGGCT CTTTGCCGGT CACACCGCCG GAGAGGGCGC ATGA
 
Protein sequence
MKKLVILISG RGSNMEAIVR ACSNEAWPAR VAAVIANRPD AAGLAFAASH GIATAVVDHR 
QFPDRDSFDA ALAKEIDSFA PDLVVLAGFM RVLTAGFVDH YAGRMLNVHP SLLPSFPGLK
THQQALDAGV RLHGASVHFV TSQLDHGPIV AQAAVPVETG DTPAMLAERV LATEHIIYPR
AVRWFVEGRL ALDGLRVTLT PPEPQWLFAG HTAGEGA