| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3154 |
|---|
| Symbol | |
|---|
| ID | 6283683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3549639 |
|---|
| End bp | 3550835 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642622728 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_001896770 |
|---|
| Protein GI | 187925128 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0357415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0600742 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTGAATT CTTTGCTCGA CTTCCTTGCC CACGGTCTGC TGCACTTCTC GTGGTGGCAA
CTTGTGCTGT ACACGGCGAT CGCGACGCAC ATCACGATCA TCGGCGTGAC GGTCTATCTG
CATCGCTGCC AGGCGCACCG TGCGCTGGAG CTGCATCCGG TCGTCAGTCA TTTTTTCCGT
TTCTGGCTGT GGATGACCAC GGGCATGTTG ACCGGCCAGT GGGCCGCGAT TCACCGTAAG
CACCACGCCA AGTGCGAGAC CGAAGAAGAT CCGCACAGCC CGCAGACGCG CGGCATCTGG
AAGGTGCTGC TCGAAGGCGC GGAACTGTAT CGCGTCGAAG CGAAAAACGA AGAAACCATG
CGCAAGTTCA GTCACGGCAC GCCGAACGAC TGGATGGAGC GCAACGTCTA CACCAAGTAC
CCGATCCTCG GCGTGAGCCT GATGATGGTG CTGAACGTCG CGTTGTTCGG CGTCGTCGGT
CTGACCATCT GGGCCGTGCA AATGGTGTGG ATCCCGTTCT GGGCCGCCGG CGTGGTCAAC
GGCCTGGCGC ACTTCTGGGG CTATCGCAAC TTCAACTCGT CGGATGCGAG CACCAACATC
TTCCCGTGGG GCATCATCAT CGGCGGTGAA GAGCTGCATA ACAATCATCA CACGTATGCA
ACGTCGGCCA AGCTGTCAAA CAAGTGGTAC GAGTTCGATA TCGGCTGGAT GTACATCCGG
ATCATGTCGG CATTCCGTCT GGCCAAGGTG AAGAAGGTGG CGCCCACGCC GCGTCTGACC
ACCGGCAAGC TGGTGCTCGA TCAGGACACG CTGCAAGCCG TGCTGGCCAA CCGCTACGAA
GTGATGGCGC GTTACGGTAA GGCGCTCAAG CGCGCCTATC GTCAGGAACT GGCGCATTTG
AAGGAAGTCG GCGCGCGCGA GAAGTACCAG GTCATGCGCG GCGCGCGTAG CTGGTTCCAC
AAGGAAGAGG CGGGTCTCGA CGAGCCGCAG AAACGCCAGC TGCCGCAAAT CTTCGCGAAC
AGTCAGAAGC TCAAGACTTA CATCGACATG CGCAATGAGC TCGCTGCCAT GTGGGAGCGC
TCGAATGCAT CGCGCGACCA GTTGCTGATC CAGTTGCAAG ATTGGTGTCA TCGCGCTGAG
CAGAGCGGTA TTAAAGCGCT GCAAGAGTTT GCGATGCGAC TGCGTCGTTA TGCCTGA
|
|---|
| Protein sequence | MLNSLLDFLA HGLLHFSWWQ LVLYTAIATH ITIIGVTVYL HRCQAHRALE LHPVVSHFFR
FWLWMTTGML TGQWAAIHRK HHAKCETEED PHSPQTRGIW KVLLEGAELY RVEAKNEETM
RKFSHGTPND WMERNVYTKY PILGVSLMMV LNVALFGVVG LTIWAVQMVW IPFWAAGVVN
GLAHFWGYRN FNSSDASTNI FPWGIIIGGE ELHNNHHTYA TSAKLSNKWY EFDIGWMYIR
IMSAFRLAKV KKVAPTPRLT TGKLVLDQDT LQAVLANRYE VMARYGKALK RAYRQELAHL
KEVGAREKYQ VMRGARSWFH KEEAGLDEPQ KRQLPQIFAN SQKLKTYIDM RNELAAMWER
SNASRDQLLI QLQDWCHRAE QSGIKALQEF AMRLRRYA
|
|---|
| |