| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3146 |
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| Symbol | ispH |
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| ID | 6281527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3542517 |
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| End bp | 3543476 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622720 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001896762 |
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| Protein GI | 187925120 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.61961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACCA CGGATACGAC TCTTGCTGAA ACCGAGATCC TGCTGGCGCA GCCGCGCGGG
TTCTGCGCCG GCGTCGACCG GGCGATCGAG ATCGTCGAGC GGGCTATCAA ACTGCACGGC
TCGCCGATCT ACGTGCGTCA CGAGATTGTC CATAACGCCT ATGTCGTCGA GGATCTGCGC
AAAAAAGGCG CGATCTTCAT CGAGCGGCTT GAAGAAGTGC CGGCCGGCAA TACGGTCATT
TTCAGCGCGC ACGGGGTGTC GAAGGCCGTG CGTTCGGAAG CCGAGTCGCG CGGGCTGCGC
GTGTACGACG CGACGTGTCC GCTCGTGACC AAAGTACATA TCGAAGTCGC AAAGATGCGC
CAGGACGGCT TCGACATCGT GATGATCGGC CACAAGGGCC ATCCTGAAGT CGAAGGCACG
ATGGGGCAGG CGGGCGAGGG CATGCATCTG GTGGAAGACA TCGACGACGT GCAGGCCTTG
CAGCTGGCCG ACCCCGAGCG GATCGCCTTC GTTACGCAAA CCACGCTATC GGTCGACGAC
GCCGCCGAGA TCATCGGCGC GTTGAAGGCC AAATACCCGT CCATCCGCGA GCCGAAGAAG
CAGGACATCT GCTACGCCAC GCAAAACCGC CAAGACGCGG TGAAGTTCAT GGCGCCGCAG
TGCGACGTCG TGATCGTAGT CGGCAGCCCG AATAGTTCGA ACTCCAACCG GCTGCGCGAA
CTGGCCGAAA AGCTCGGCGT GCCCGCCTAT ATGGTGGACT CGCCTGATCA GATCGATCCG
GTCTGGGTGG AAGGCAAACG CCGCATCGGC GTGACGGCCG GCGCCTCGGC GCCGGAAGTG
CTGGCGCAGG CTGTTATAGC CCGGCTGCGT GAGCTCGGCG TGCGCAACGT GCGCGCGCTG
GAGGGCATCG AGGAAAACAT CGCGTTTCCG CTGCCGCGCG GGCTCGGTCT GCCGGCCTGA
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| Protein sequence | MSTTDTTLAE TEILLAQPRG FCAGVDRAIE IVERAIKLHG SPIYVRHEIV HNAYVVEDLR
KKGAIFIERL EEVPAGNTVI FSAHGVSKAV RSEAESRGLR VYDATCPLVT KVHIEVAKMR
QDGFDIVMIG HKGHPEVEGT MGQAGEGMHL VEDIDDVQAL QLADPERIAF VTQTTLSVDD
AAEIIGALKA KYPSIREPKK QDICYATQNR QDAVKFMAPQ CDVVIVVGSP NSSNSNRLRE
LAEKLGVPAY MVDSPDQIDP VWVEGKRRIG VTAGASAPEV LAQAVIARLR ELGVRNVRAL
EGIEENIAFP LPRGLGLPA
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