| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3145 |
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| Symbol | |
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| ID | 6282922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3540777 |
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| End bp | 3541976 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642622719 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001896761 |
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| Protein GI | 187925119 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00633656 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTCA GATTTGCTTA CGCCGTGTCC ATCGCGGCCG CGGTTGCGAT GTTGACCGCG
TGCGGCAAGA AACAGGATGG CGAGGCGGGA GCGGGTGCGT CGGCGGCTAC GGTTGCGGCG
GCACCGGCGA GCGAAGCGAC TGTCGTGAAG ATCGGCCATG CGGCCCCATT GACCGGGCCC
ATTGCTCATC TCGGTAAAGA CAATGAAAAC GGCGCGCGTT TGGCGATCGA TGAAATCAAC
ACCCAGGGTT TGACTATCGA CGGCCACAAG ATCCAGTTGG AGCTCGATGC GCAAGACGAC
GCCGCGGACC CGAAAACGGG CACGGCGGTC GCTGAAAAAT TCGTCGACGA TCATGTCGTC
GCCGTGGTCG GCCACTTGAA TTCTGGCGTC TCGATTCCGG CGTCCAAGAT ATATAGCGAT
GCCGGGATCC TGGAAATCTC GCCGTCGTCC ACGAACCCGG GGTACACGCA ACAAGGTTTC
AAGACGACAT ATCGCGTGGT CGCGACCGAT GCCCAGCAGG GGCCGGCGCT CGCCAACTAC
GCAACGAAAG TGCTCAACGC GAAACGCATC GCGATCGTCG ATGACTCGAG CGTCTACGGC
AAGGGCCTGG CGGACGAGTT TGCGAAGACA GTACAGGCGA GCGGGGCAAA GATCGTTGCG
CGCGAAAGCA CGAATGACAG GGCTACGGAG TTTCAGGCCG TCCTTAGGAA GATCAAGCGT
GTTCAGCCGG ACGTGATCAT GTTCGGCGGC ATGGACGCAA CGGGCGGGCC GTTCACCAAA
CAGGCGGCGG CGCTCGGTAT CAGGGCAAAA ATCCTTGGCG GCGACGGTGT GTGTACCGAC
AAGGTGGGTG AGCTGGCGGG AACCGCCGTG CAAAACCTGG TCTGTTCGGA GGCAGGACTT
GCGCTTTCGA AAATGGACAA GGGAGCGGAC TTCGAAAAGA AGTACGTGGA CCGCTTCCAC
ACACCGGTGC AGATTTACGC GCCGTTCACG TATGACGCTG TGTACGTGAT TGTCGATGCA
ATGAAGCGCG CTAATTCGAT CGAGGCGCCC AAGGTGCTGG CTGCGATGCC ATCGACCGAT
TACAACGGGG TAATCGGTCA CATCGCGTTC GACGACAAGG GTGATTTGAA AGAGGGCGCC
ATTACGCTTT ACGACTTCAA GGACGGCAAG AAAGCAGTTC TCGACGTCGT GAAGATGTGA
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| Protein sequence | MRVRFAYAVS IAAAVAMLTA CGKKQDGEAG AGASAATVAA APASEATVVK IGHAAPLTGP
IAHLGKDNEN GARLAIDEIN TQGLTIDGHK IQLELDAQDD AADPKTGTAV AEKFVDDHVV
AVVGHLNSGV SIPASKIYSD AGILEISPSS TNPGYTQQGF KTTYRVVATD AQQGPALANY
ATKVLNAKRI AIVDDSSVYG KGLADEFAKT VQASGAKIVA RESTNDRATE FQAVLRKIKR
VQPDVIMFGG MDATGGPFTK QAAALGIRAK ILGGDGVCTD KVGELAGTAV QNLVCSEAGL
ALSKMDKGAD FEKKYVDRFH TPVQIYAPFT YDAVYVIVDA MKRANSIEAP KVLAAMPSTD
YNGVIGHIAF DDKGDLKEGA ITLYDFKDGK KAVLDVVKM
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