Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3141 |
Symbol | |
ID | 6282918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3536898 |
End bp | 3537614 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642622715 |
Product | ABC transporter related |
Protein accession | YP_001896757 |
Protein GI | 187925115 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0818776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACAG CAATGTTGAA AATCAAGGGC CTGCAGGTCA ATTACGGCGG CATCCAGGCA GTCAAGGGGA TCGATCTCGA GGTCGCGCAG GGCGAACTGG TCACGCTGAT CGGCGCGAAC GGCGCGGGCA AGACCACGAC GATGAAGGCG ATCACGGGTC TGAAGCCCTA CACGATCGGC GACATCGAGT ACATGGGCGA GTCGATCAAG GGCGTGCCGC CGCATCTGCT GTTGAAGAAG GGTCTGGCAA TGGTGCCGGA AGGGCGCGGC ATCTTCGCGC GCATGTCGAT CGTCGAAAAC ATGCAGATGG GTGCTTATCT GCGTACGGAT ACGGACGGCA TCAAGGCGGA CGTCGATCGC ATGTTCGGTT TTTTCCCGCG TCTGAAGGAG CGTGCGGCGC AGTACGCCGG CACGCTTTCG GGCGGCGAAC AGCAGATGCT GGCGATGGCG CGCGCGATCA TCTCGCGTCC GAAGCTGTTG TTGCTTGACG AGCCGTCGAT GGGCCTGTCG CCGATCATGG TCGAGAAGAT CTTCGAAGTG GTGCGGGCGA TTTCGGCTGA AGGCATGACC GTGCTGCTGG TCGAGCAGAA CGCGCGTCTG GCGCTGCAGG CAGCGAATCG CGGTTACGTG ATGGACTCGG GTCTGGTCAC GATGTCGGGT GACGCGAAGC AGATGCTGGA TGATCCGAAG GTGCGGGCAG CGTATTTGGG TGAATAA
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Protein sequence | MATAMLKIKG LQVNYGGIQA VKGIDLEVAQ GELVTLIGAN GAGKTTTMKA ITGLKPYTIG DIEYMGESIK GVPPHLLLKK GLAMVPEGRG IFARMSIVEN MQMGAYLRTD TDGIKADVDR MFGFFPRLKE RAAQYAGTLS GGEQQMLAMA RAIISRPKLL LLDEPSMGLS PIMVEKIFEV VRAISAEGMT VLLVEQNARL ALQAANRGYV MDSGLVTMSG DAKQMLDDPK VRAAYLGE
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