Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3130 |
Symbol | |
ID | 6284439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3524260 |
End bp | 3525822 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642622704 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_001896746 |
Protein GI | 187925104 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.777715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGC TGGTCCCGTC TTCTCCGTTT CGTTTGCGCG CGCTGATCAG CGGCGGCGCG GTGGTGTTCG CGATGCTCGC GGGCAATGCG GCGCACGCCG ACACTACGGC CGTGATGGCC GTCGCCTCGA CCTTCACGAC GCTCGATCCG TACGATGCCA ACGACACGCT CTCGCAAGCC GTCGCGAAGT CGTTCTATCA GGGGCTGTTC GGCTTCGACA AGGACATGAA GCTGGTCAAC GTGCTGGCCG ACAGCTACGA AGCCAGCCCG GATGCGAAGG TTTACACGTT CAAGCTGCGC CACGGCGTGA AGTTCCAGGA CGGCACCGAC TTCAACGCAG CGGCGGTGAA AGCGAACTTC GACCGCGTGA CCGATCCGGC GAACAAGCTC AAGCGCTACA ACATGTTCAA CCGCATCGAG AAGACCGAAG TGGTCGATCC GTACACGGTG AAGATCACGC TGAAGGCGCC GTTCTCGGCG TTCGTCAACG TGCTGGCGCA TCCGTCGGCG GTGATGATTT CGCCGGACGC GCTGAAGAAG TATGGCAAGG ACATCGCGTT CCATCCGGTC GGCACGGGTC CGTTCGAACT GGTGAAGTGG GATCCGGCGG GCGATCTGAC GGTGAAGAAG TTTGCCGGCT ACTGGAAGAA GGGCTACCCG AAGGTCGACG CGATCGACTG GAAGCCGGTG GTCGACAACA ACACGCGCGC TGCGTTGATG CGCACAGGCG AAGCGGATTT CGCGTTCCAG GTGCCGTTCG AACAGGCCGC GCAATTGCAG ACGAGCCCGA AGGTCGATCT GATCGCGTCG CCGTCGATCA TTCAGCGCTA TATCAGCCTG AACGTGAACC AGAAACCGTT CGACAATCCG AAGGTGCGTG AAGCGCTGAA CTACGCGGTC AACAAGGACG CGCTCACCAA GGTCGTGTTC GCCGGTTACG CAACGCCGGC CGACGGCGTG GTGCCGCAAG GCGTCGACTA TGCGGTGAAG CAGGGCCCGT GGCCGTACGA TCCCGCCAAG GCGCGCGCGT TGCTGAAGGA AGCGGGTTAT CCGAACGGTT TCGAAACCAC GCTGTGGTCC GCGTATAACT ACTCGACCGC ACAGAAGGTG ATCCAGTTCG TGCAGCAGCA ACTCGCGCAA GTGGGCATCA AGGCCCAGGT CGAAGCGCTC GAAGCGGGTC AACGCGTGGC CAAGGTGGAA AGCGCGCAGG ACGCCGCGAC GGCGCCGGTT CGCATGTACT ACGCGGGCTG GTCCTCGTCG ACGGGCGAAG CGGATTGGGC GATCACGCCG CTGCTCGCGT CGGTCTCGTT CCCGCCGAAG ATGGTCAACA CCGCCTACTA CAAGAACGAT ACCGTCGACA GCGATCTGAA GCAGGCGCTC GAAACCACCG ACCGCACGAA GAAAGCCGAG CTCTACACGG ACGCGCAAAA ACGCATCTGG GCCGACGCGC CGTGGATTTT CCTCGTCAAG GAGAAGGTCG TGTACGCGCG CAGCAAGCGT CTGTCGGGTG CGTATGTGGC GCCGGACGGT TCGTTCAATT TCGACGAGAT CGCGATCAAG TGA
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Protein sequence | MNLLVPSSPF RLRALISGGA VVFAMLAGNA AHADTTAVMA VASTFTTLDP YDANDTLSQA VAKSFYQGLF GFDKDMKLVN VLADSYEASP DAKVYTFKLR HGVKFQDGTD FNAAAVKANF DRVTDPANKL KRYNMFNRIE KTEVVDPYTV KITLKAPFSA FVNVLAHPSA VMISPDALKK YGKDIAFHPV GTGPFELVKW DPAGDLTVKK FAGYWKKGYP KVDAIDWKPV VDNNTRAALM RTGEADFAFQ VPFEQAAQLQ TSPKVDLIAS PSIIQRYISL NVNQKPFDNP KVREALNYAV NKDALTKVVF AGYATPADGV VPQGVDYAVK QGPWPYDPAK ARALLKEAGY PNGFETTLWS AYNYSTAQKV IQFVQQQLAQ VGIKAQVEAL EAGQRVAKVE SAQDAATAPV RMYYAGWSSS TGEADWAITP LLASVSFPPK MVNTAYYKND TVDSDLKQAL ETTDRTKKAE LYTDAQKRIW ADAPWIFLVK EKVVYARSKR LSGAYVAPDG SFNFDEIAIK
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