Gene Bphyt_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3119 
Symbol 
ID6282488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3511946 
End bp3512782 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content62% 
IMG OID642622692 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_001896735 
Protein GI187925093 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.592205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGC TATTGGCTTG CAAGGCGCTG ATTCTGGGCG TCGTCGAGGG ATTGACGGAG 
TTTTTGCCCG TATCGAGCAC CGGGCATTTG ATCGTCGCGG GCAGTCTGCT GAACTTTACC
GATGAGCACG CGAAAACCTT CGATGTCGTG ATCCAGCTCG GCGCGATTCT CGCCGTGTGC
TGGGAATTCC GTCGCCGTAT CGGCAGTGTG GTGTCCGGTC TGCCGACCCG GCCGGATGCG
CGCCGCTTTA CACTGAACGT GATCATCGCC ACGATTCCGG CCATCGTGCT CGGCTTGCTG
TTCGAGAAAT CCATCAAGGC GGCGTTGTTC TCTCCGGTGC CGGTCGCGTT CGCGCTGGTG
GCGGGCGGTG TCGTGATCCT GTGGGCGGAG GCGCGTCAGC GCGCGCAAGG CGAGACGCAA
GCGCGCGTGC AGAGCGTGGA CGACCTGAGC GCGCTGGACG CGCTGAAAGT CGGCCTCGCG
CAATGTTTCG CGCTGATTCC GGGCATGTCG CGCTCGGGCT CGACGATCAT CGGCGGGATG
CTATTCGGTC TCGACCGGCG CGTCGCCACG GAGTTTTCGT TCTTCCTCGC GATTCCGATC
ATTTTCGGCG CAACCGCTTA CGAGCTGTAC AAAGACTGGC ACCTGCTTTC CGTCGATGCG
CTCGGCACCT TCGCGATCGG TTTCGCGGCG GCGTTCGTCA GTGCTTTTGC CTGCGTGCGC
TGGCTGTTGC GCTACATCGC CGCGCACGAT TTCACCGCGT TTGCGTGGTA TCGCATCGGC
TTCGGGCTGC TGATCCTGCT GGTTGGTTAT AGCGGCGCGT TGAGCTGGAC AGAGTAA
 
Protein sequence
MDWLLACKAL ILGVVEGLTE FLPVSSTGHL IVAGSLLNFT DEHAKTFDVV IQLGAILAVC 
WEFRRRIGSV VSGLPTRPDA RRFTLNVIIA TIPAIVLGLL FEKSIKAALF SPVPVAFALV
AGGVVILWAE ARQRAQGETQ ARVQSVDDLS ALDALKVGLA QCFALIPGMS RSGSTIIGGM
LFGLDRRVAT EFSFFLAIPI IFGATAYELY KDWHLLSVDA LGTFAIGFAA AFVSAFACVR
WLLRYIAAHD FTAFAWYRIG FGLLILLVGY SGALSWTE