Gene Bphyt_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3116 
Symbol 
ID6281944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3508929 
End bp3509600 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID642622688 
Producthypothetical protein 
Protein accessionYP_001896732 
Protein GI187925090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.727095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTGC AACTTGCCAG CCATTTCGTG GCATTTATAG ATCTTCTGGG TTTTTCCGAG 
ATGGTACGGA TCGACTGCGA ATCATCTCAC GCCCCTAAAT ACCTGGAGAT TTTGTATGAT
GCGCATCTTC GAGCGGCGAC TCTCTTTAGC AAAGATTTAG ACTCCGGCCT CACTCAGTTT
TCCGATTCAA TCGTACTGAG CCGACCGTTT GATCTTGCGT GCCTAGCCGA TTTCATCTCA
ACGATAGCTG CTTGGCAGCG TTCGCTTCTT CTCGATGGGC TTCTATGCAG AGGCGGGGTG
ACATTTGGGA AGCACTTTGT CAAGGATCGA TTCTTATTTA GCAAAGGGTT AATTGATGCT
TACCGTCTCG AAAGCACGCA AGCTAAACAC CCTCGGATAG TCATCTCGGA AAACTTGCTT
CAGCTCGCCC ACCCGACGGT AGAAATCGGA ACGCTGAATC TGATCCAAGA GGAAGATGGC
ATTTCATTCA TAGACTATCT TGCAATAGAC AACCAGAACG AAAAGGAGAA ATTCTCCGCA
GCGATTCAGA CAGTGATGGC AGCATCACCA AATGGCGATG CCTCTGTGCA AGAAAAGATG
CGTTGGCTAG CACGTTATGC CGATCACAAA CTAGGAACCA ATTTATCTGG ACCAAGGTTT
GCTATCTTGT AA
 
Protein sequence
MPLQLASHFV AFIDLLGFSE MVRIDCESSH APKYLEILYD AHLRAATLFS KDLDSGLTQF 
SDSIVLSRPF DLACLADFIS TIAAWQRSLL LDGLLCRGGV TFGKHFVKDR FLFSKGLIDA
YRLESTQAKH PRIVISENLL QLAHPTVEIG TLNLIQEEDG ISFIDYLAID NQNEKEKFSA
AIQTVMAASP NGDASVQEKM RWLARYADHK LGTNLSGPRF AIL