Gene Bphyt_3111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3111 
Symbol 
ID6281939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3503769 
End bp3504707 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content68% 
IMG OID642622683 
ProductNADP oxidoreductase coenzyme F420-dependent 
Protein accessionYP_001896727 
Protein GI187925085 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.727312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGT CCTCTCTGCC GCGCCTCGGC ATTATCGGTG CGGGCCGGCT CGCGCGTTGC 
CTCGCGCTGA GCTTTTCACG CGCCGGCTAT CCGGTCACGG CGGTGGCAAG TCGCTCGGCG
ACATCCGCCG GCCGGCTTGC CAGTCAAATC GAGCATTGCG CGGCAGTGGA GAACCCACAA
CAGGTTGTCG ACGCCGCCGA TATCGTCTTT TTAGCTGTTC CCGATGACAG CATCGGTACG
TCAGCGCACA CACTCCGGTT CAGCCCGGAC GACGCGGCCG GCGCGCACGG CAAGGCGCTC
GTGCACTGCA GCGGCGCTTC GCCGGTCGAA TTGCTCGCCC CGGCACGCGA TCAGGGCGCG
TCGATCGGCG GGTTTCATCC ACTGTACCTC TTTAGCGGCG AACTCGCCGA TCTGGAGCGC
ATCGCCGGTT GTTCCGTGAC GATCGAGGCC GACGGCGCCC TGAAGGACAC GTTGACAGCC
CTCGCCGTCG CGCTGCGCTG CCATCCGCTG TCGATTCCGG CGGGCGGTCG CATGCTCTAT
CACGCCGCCG CGCACTACGC CGCCAGTTTC GCGCTGTGCA GCCTCGCGGA ATGCGTCGCG
CTGTGGCGCA CGCTGGGCTT TGCCGAAGAC GACGCGCTGC GCGCGCTGCT GCCGATGCTC
TCCGGCACCA TCGAAACCGC CCGCGACAAG GGTTTGCCCA ATGCGCTCGC GGGCCCGGTA
TCGCGCGGCG ACACGGGCGT GGTTCAGAAA CAGCTAGCGC TGCTGGAAGG CCTCGGCGGC
GACCACGCCG CGCTGTACGG GCTGATGTCG CGGCGCGCGG TCGGACTGGC CGAACGCCGT
GTCACGCCGC CCGCCGCGAT CGACGCCATC TCCGAGGCCG TGGAAGAATC GCTCAACCGG
TCGCTGAATC AGGCCGCGGC AGGTGCAAGC GTCAAGTAA
 
Protein sequence
MSQSSLPRLG IIGAGRLARC LALSFSRAGY PVTAVASRSA TSAGRLASQI EHCAAVENPQ 
QVVDAADIVF LAVPDDSIGT SAHTLRFSPD DAAGAHGKAL VHCSGASPVE LLAPARDQGA
SIGGFHPLYL FSGELADLER IAGCSVTIEA DGALKDTLTA LAVALRCHPL SIPAGGRMLY
HAAAHYAASF ALCSLAECVA LWRTLGFAED DALRALLPML SGTIETARDK GLPNALAGPV
SRGDTGVVQK QLALLEGLGG DHAALYGLMS RRAVGLAERR VTPPAAIDAI SEAVEESLNR
SLNQAAAGAS VK