| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3106 |
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| Symbol | |
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| ID | 6284575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3499101 |
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| End bp | 3500669 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622678 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001896722 |
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| Protein GI | 187925080 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.540273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA AAGACCTACG CGATTTCGTC GGCCGTCTCG AGACGATCGG TGAACTGCGC
CGCATCTCGC AAAACGTCTC GCCTGTCCTG GAAATGACCG AGTTGTGCGA CCGCGTGCTG
CGCGCCGGCG GTCCGGCTTT GCTGTTCGAA AGCAAGGCAC AGCATGAGTT CCCGGTGCTC
GGCAACCTGT TCGGTACGCC TCGGCGGGTC GCGCTCGGCA TGGGGGTGGA TGCGCAAGCC
GGCGAAGGCG ACGGCGCCGC ACTCGAATCG CTGCGCGACG TGGGCCGGCT GCTCTCCGCA
TTAAAGGAGC CGGAGCCGCC GAAGGGTCTC AAGGACGCCG GCAAACTGTT CTCGCTCGCG
AAGGCCGTGT GGGACATGGC GCCCAAAACG GTGAGCGCGC CGCCCTGCCA GGAAATCGTC
TGGGAAGGCA ACGATGTCGA CCTCGCCAGG CTGCCCATTC AGACGTGCTG GCCCGGCGAT
GCCGGCCCGC TAATCACATG GGGCCTGACC GTTACAAAAG GCCCGAACAA GAGCCGACAA
AACTTAGGCA TATATCGCCA GCAGTTGATC GGACGTAACA AACTGATCAT GCGATGGCTC
GCGCATCGCG GCGGCGCGCT CGACTTTCGG GAGTTCGCGC TGCAGAACCC CGGCAAGCCG
TATCCGGTGG CCGTCGTGCT GGGCGCCGAC CCGGCGACGA TCCTCGGCGC GGTCACGCCG
GTGCCCGACA CGCTCTCCGA ATACCAATTC GCCGGGCTGC TGCGCGGCGG CCGCACCGAA
CTGGCTAAGT GCATCACGCC GGGCGTCGAC GGTTTGCAGG TGCCGGCGCG CGCCGAGATC
GTGCTCGAAG GCTTCATCTA TCCGCAGGAA GGCGCGCCTT CGCCCGCTCC CGCAGGCGCG
CCGCCGCGTC CGGTCAAGGG CGCGTCGGCG GCCTATGAAC ATGCGCTGGA AGGCCCGTAC
GGCGACCACA CCGGCTACTA CAACGAGCAG GAGTGGTTCC CCGTCTTTAC CGTCGAGCGC
ATTACCATGC GGCGCGACGC CATCTACCAC TCCACGTACA CCGGCAAACC GCCCGACGAA
CCGGCCGTGC TCGGCGTCGC GCTCAACGAA GTGTTCGTGC CGCTGTTGCA AAAGCAGTTC
AGCGAGATCA CAGACTTCTA TCTGCCACCC GAAGGCTGCA GCTACCGGAT GGCCATCGTG
CAGATGAAGA AGAGCTACCC CGGCCACGCC AAACGCGTGA TGTTCGGCGT GTGGAGCTTC
CTGCGGCAGT TCATGTATAC GAAGTTCATC GTCGTGGTCG ACGAGGACGT GAATATCCGC
GACTGGAAGG AGGTGATCTG GGCGATCACC ACCCGCATCG ATCCGGCGCG CGACACGGTG
CTGGTGGATC GCACGCCGAT CGACTACCTG GATTTCGCCT CGCCCGTGGC CGGCCTCGGA
TCGAAGATGG GCCTCGACGC GACCAACAAG TGGCCCGGGG AAACCGATCG CGAATGGGGC
CGCCCCATCG TGATGGACGA CGCGGTCAAA CAGCGCATTG ACACCTTGTG GAACGAGTTG
GGCCTCTGA
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| Protein sequence | MKYKDLRDFV GRLETIGELR RISQNVSPVL EMTELCDRVL RAGGPALLFE SKAQHEFPVL
GNLFGTPRRV ALGMGVDAQA GEGDGAALES LRDVGRLLSA LKEPEPPKGL KDAGKLFSLA
KAVWDMAPKT VSAPPCQEIV WEGNDVDLAR LPIQTCWPGD AGPLITWGLT VTKGPNKSRQ
NLGIYRQQLI GRNKLIMRWL AHRGGALDFR EFALQNPGKP YPVAVVLGAD PATILGAVTP
VPDTLSEYQF AGLLRGGRTE LAKCITPGVD GLQVPARAEI VLEGFIYPQE GAPSPAPAGA
PPRPVKGASA AYEHALEGPY GDHTGYYNEQ EWFPVFTVER ITMRRDAIYH STYTGKPPDE
PAVLGVALNE VFVPLLQKQF SEITDFYLPP EGCSYRMAIV QMKKSYPGHA KRVMFGVWSF
LRQFMYTKFI VVVDEDVNIR DWKEVIWAIT TRIDPARDTV LVDRTPIDYL DFASPVAGLG
SKMGLDATNK WPGETDREWG RPIVMDDAVK QRIDTLWNEL GL
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