Gene Bphyt_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3096 
Symbol 
ID6284757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3488294 
End bp3489514 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content64% 
IMG OID642622668 
Productdrug resistance transporter, Bcr/CflA subfamily 
Protein accessionYP_001896712 
Protein GI187925070 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0673947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCACG TCGCCAGAAG CCGGCCCGAT GGCCGGCTGA TTCTGTTGCT CGGTGCGCTT 
GCCGCATGCG GGCCGATTTC CATCGACATG TATCTGCCGA GCCTGCCGAC CATCGCGCAG
GCGTTCGCCA TCAGCACCGG CGCCGCGCAG ACCACGCTCA CCAGCTTCAT GTTCGGCTTT
TCGATCGGCA TGCTGCTCTA TGGTCCGCTG TCGGATACCT ATGGCCGCCG GCCCGTATTG
CTCGGCGGCA TCGTCATGTA CGCGCTGGCT AGCGTGGCCT GCGCGATGTC GTTCTCGATC
GGCTCGCTCG TGACGTTCCG CTTCGTGCAG GCGCTGGGCG CGGGCGCCGC CTCGGTGCTG
GCGCGCGCCA TCGCACGCGA CGCCCACGGT CCGACCGATG CCGCTCGCGT GTTGTCGATG
CTTGCCATCG TCACGTCGAT CGGACCGTTA CTCGCGCCGC TCATCGGCGG ACAGTTGCTG
CTGCTCGGCG GCTGGCGCGT GGTGTTTATC GTGCTGACGC TGTTCGGCAC GGTGTGCGCA
ATCACTGCGT TTCTCAAAGT GCCGGAAACC TGGCCGCGTG AGAAGCGTGC GCACTCGGCG
TTGCTGAAGT CATTCGGCGC GTATGGCAAG CTGCTACGCG ATCCGGTTGC GTGGGGGCAC
ATGCTGTGCG GCGGCATGGC GTTCGCGTCG ATGTTCGCGT ACATCACCGC GACGCCGTTC
GTCTACATCG AATATTTCCA TGTGTCGGCG CAGCATTATG GCTTTCTGTT CGCGCTGAAT
ATCGTCGGCA TTATGTTCGG CAACTTCATG AATACGCGGC TCGTCGGCCG GCTCGGTTCG
CTGCCGATCA TTTCTTTCGC CGCGACCGTG AGCTGCATTG CGTCGCTGTT TGTCTGTCTC
GTGTCGCTGA CCGGCTGGGG CGGTCTGTGG TCGATCGTGT TCGGGCTGTT CTTTGTGGTC
GGCGTGGTCG GTCTTCTGTC CGCCAACTGC ACGACCGATT TGATGCATCG CTATCCGCAG
AATGCCGGCG CCGCGGCCGC CGTGTTCGGC GCCGTGCAGT TGGCGCTTGG CGCGTTGTCG
AGCCTTGCTG TCGGACTCTG GCAGGACGGT TCGCCCAAGG GCATGGGCGC GACGGTGGGC
GTGGCGGGCT TGCTGTGTTA TCTCGGCCGG ATTCTAGTTG TTAGGTGGCA CGGGACCAAG
GCGCCTGTCG CTGCTGCGTG A
 
Protein sequence
MSHVARSRPD GRLILLLGAL AACGPISIDM YLPSLPTIAQ AFAISTGAAQ TTLTSFMFGF 
SIGMLLYGPL SDTYGRRPVL LGGIVMYALA SVACAMSFSI GSLVTFRFVQ ALGAGAASVL
ARAIARDAHG PTDAARVLSM LAIVTSIGPL LAPLIGGQLL LLGGWRVVFI VLTLFGTVCA
ITAFLKVPET WPREKRAHSA LLKSFGAYGK LLRDPVAWGH MLCGGMAFAS MFAYITATPF
VYIEYFHVSA QHYGFLFALN IVGIMFGNFM NTRLVGRLGS LPIISFAATV SCIASLFVCL
VSLTGWGGLW SIVFGLFFVV GVVGLLSANC TTDLMHRYPQ NAGAAAAVFG AVQLALGALS
SLAVGLWQDG SPKGMGATVG VAGLLCYLGR ILVVRWHGTK APVAAA