Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3081 |
Symbol | greB |
ID | 6283824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3474907 |
End bp | 3475476 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642622650 |
Product | transcription elongation factor GreB |
Protein accession | YP_001896697 |
Protein GI | 187925055 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0292072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGG CCTTTGTCAA AGAGTCGAGC GAAGAGAATG ACGACGATCT CGACGTCGCC CAGCCGGACG TTCCCGCTGG CACGAAAAAC TACATCACGC CCGCCGGCTA TCGGCGCATG CGCGATGAAC TGCTGCATCT GATCGATGTG GATCGGCCGG AAGTGGTCAA ACTGGTGTCG TGGGCGGCCT CGAACGGCGA TCGCTCGGAG AATGGCGATT ACATCTATGG CAAGCGCCGG TTGCGCGAAA TCGACCGGCG CATCCGTTTT CTGACCAAAC GCCTGGACCT CGCTGAAGTG GTCGACAGCA GTAAGCAGGA GAATGTCGAC CAGGTTTTCT TCGGTGCAAC CGTCGAGTAT GCGACGCAGG ACGGCGAGAC GCATATCGTG ACGATTGTCG GCATTGATGA GGTCGATCTC GATATCGGTC ACGTCAGCTG GATCTCGCCG ATTGCGCGTG CGCTGCTCAA GGCGAAAGTC GGCGATACGG TCACGTTGTA CACGCCCGCC GGCCCGCAGC CGATCGATAT ACTCGACGTC AAATATCCGC CGCCGGATAC GGGCGGTTGA
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Protein sequence | MNKAFVKESS EENDDDLDVA QPDVPAGTKN YITPAGYRRM RDELLHLIDV DRPEVVKLVS WAASNGDRSE NGDYIYGKRR LREIDRRIRF LTKRLDLAEV VDSSKQENVD QVFFGATVEY ATQDGETHIV TIVGIDEVDL DIGHVSWISP IARALLKAKV GDTVTLYTPA GPQPIDILDV KYPPPDTGG
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