Gene Bphyt_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3081 
SymbolgreB 
ID6283824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3474907 
End bp3475476 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content59% 
IMG OID642622650 
Producttranscription elongation factor GreB 
Protein accessionYP_001896697 
Protein GI187925055 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0292072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGG CCTTTGTCAA AGAGTCGAGC GAAGAGAATG ACGACGATCT CGACGTCGCC 
CAGCCGGACG TTCCCGCTGG CACGAAAAAC TACATCACGC CCGCCGGCTA TCGGCGCATG
CGCGATGAAC TGCTGCATCT GATCGATGTG GATCGGCCGG AAGTGGTCAA ACTGGTGTCG
TGGGCGGCCT CGAACGGCGA TCGCTCGGAG AATGGCGATT ACATCTATGG CAAGCGCCGG
TTGCGCGAAA TCGACCGGCG CATCCGTTTT CTGACCAAAC GCCTGGACCT CGCTGAAGTG
GTCGACAGCA GTAAGCAGGA GAATGTCGAC CAGGTTTTCT TCGGTGCAAC CGTCGAGTAT
GCGACGCAGG ACGGCGAGAC GCATATCGTG ACGATTGTCG GCATTGATGA GGTCGATCTC
GATATCGGTC ACGTCAGCTG GATCTCGCCG ATTGCGCGTG CGCTGCTCAA GGCGAAAGTC
GGCGATACGG TCACGTTGTA CACGCCCGCC GGCCCGCAGC CGATCGATAT ACTCGACGTC
AAATATCCGC CGCCGGATAC GGGCGGTTGA
 
Protein sequence
MNKAFVKESS EENDDDLDVA QPDVPAGTKN YITPAGYRRM RDELLHLIDV DRPEVVKLVS 
WAASNGDRSE NGDYIYGKRR LREIDRRIRF LTKRLDLAEV VDSSKQENVD QVFFGATVEY
ATQDGETHIV TIVGIDEVDL DIGHVSWISP IARALLKAKV GDTVTLYTPA GPQPIDILDV
KYPPPDTGG