| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3076 |
|---|
| Symbol | |
|---|
| ID | 6280744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3470015 |
|---|
| End bp | 3470611 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642622645 |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_001896692 |
|---|
| Protein GI | 187925050 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01806] chorismate mutase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.359714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGTT CTTACCGCTT CGGCGCGTCA TGCATGCTCG CGCTGCTGGC TGCTCTTGCA
TTCGCGCCCG CTCCCGCCAT CGCGGATGGT GACGACACCG CGCTAACCAA TCTGATCGCG
CTTGCCTCGC AGCGCCTCGC ACTGGCGGAA CCCGTAGCGC GCTGGAAGTG GGCCAATCAC
CAGGACATCA CCGACACCCC GCGCGAAAAC GCCCTCCTCG CCGATGTCGA GAAGCGCGCA
GCGGCGGCGA ACGTCGACCC GGCGTTTGCC CGTGCTTTCT TTCAGGATCA GATCGACGCC
AGCAAGGACG TGCAAAACGC GCTGTTCGCC GCGTGGCGTC GCAGCCAGCC GCCGCAAGGA
CCCGCGCCTG ATCTGGCGAC CAGTACGAGA CCGCAGTTGG ACCGGCTGAC GCAATCGCTC
GTGGCCGGCC TTGCGCGCGT TCAGCCGTTG CGCGCGGCAC CGGATTGTCC GTCGCGCGTC
GCGCAATCGC TGGCCAACTG GAAGTCGCTG ACGCGCTACG ACTCGGCTCA TTCGAGCGCG
TTGACACGCG CTCTCGGACA CGTGTGTGAA ACGGGCGGCG TGGGCGCAAC GGGTTAG
|
|---|
| Protein sequence | MNRSYRFGAS CMLALLAALA FAPAPAIADG DDTALTNLIA LASQRLALAE PVARWKWANH
QDITDTPREN ALLADVEKRA AAANVDPAFA RAFFQDQIDA SKDVQNALFA AWRRSQPPQG
PAPDLATSTR PQLDRLTQSL VAGLARVQPL RAAPDCPSRV AQSLANWKSL TRYDSAHSSA
LTRALGHVCE TGGVGATG
|
|---|
| |