| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3060 |
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| Symbol | |
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| ID | 6281808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3453510 |
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| End bp | 3455216 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642622628 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001896676 |
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| Protein GI | 187925034 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.36768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.993674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGT TGCACGATCT GTTGTCGGTG GCCGATGACG CTGCCGCGAT GTATGCACCC
GTATGCCGGG ACGGCGCCAC GCTGCTCGAT CGCACGGCGT TTCGCGCGCG TGTTGCCGCG
CTGATCGCGC TCGTGCAAAC GCGAGACGCG CAACGCTACG CGCTGTGCAT CGACGATCCG
TTCGATTTCG CCTGCGCGCT CTTTGCGCTG TTCGCGTGCG GCAAGGAGCC GGTGATTCCG
GCCAACTCGA CGCCGGGTTA TCTCGCCGAT CTCGCCGACG CGTATGAAGT GGTACTGACG
GACGCGGATT TGCCGCCGGC CGCGTTTGCT GCCGACGCCG CCCCGGCGCA TACATCCCGC
GCCGCTTACC CGATCGACCC TCAAGCTCCG CTCACGCTCT ACACCTCAGG CAGCAGCGGC
CGCCCCAAGC CGATCCGCAA GACGCTCGCG CAATTCAACG CCGAAGTGCA TACGCTCGAA
AAGCAGTGGG GCGCGCTAGT CGGCGACGCG ACGATGCTTG CGAGCGTGCC GCATCACCAC
ATTTACGGTC TGCTGTTCCG CGTGCTATGG CCGCTCGCAG CCGGCCGCGC ATTCGATCGC
GCGGTGAGCA TCGAGCCGTT GCATCTGCAA ACGCAGATCG AGCAATGCGG TGCGGCGGTG
ATCGTATCGA CGCCCGCACA ACTGTCGCGC TGGCCCGCGT TGCCCGGTTT CGCGGACCTG
ACGCCGGCAC CGCGCGCGTT CTTTTCATCG GGCGGTCCTC TCGGGCTCGA AGCCGCACAG
GAATACGCCG CCGCGTACGG CGCCGCGCCG CTTGAAATTT ACGGCAGCAC GGAAACCGGC
GGCATCGCGT GGCGGCGCCA GGATCAGACC GACGCCTGGC AAGCGGTGTC CGGCATCGAA
GTGCGCCGCG ACGACGACGG CGCGCTGAAC GTCCGCTCGC CGCATCTCGA TCACGCCGGC
TGGCACCGCA CCGACGACAA GATCGCCTTC GACGACGAGG GCCGTTTCCG CCTGCAAGGC
CGGCTCGACC GCGTGCTCAA GCTCGACGGC AAACGCGTCT CGCTGCCGGA ACTGGAAGCG
CGCCTCGCGC TGCACCCGTA TGTGGCGCAA GCGGCAATCG TGCCGCTGGA AGGCGCCTCG
CGCGAGCGCG TCGGCGCGGT CGTAGCGCTG ACCGAAGCGG GCTGCGCGGC TTTGCGCGAC
GAAGGCCGTG TGGCGCTCGC GAAAGTCCTG CGCCGCCATC TCGCCGAATA TTTCGATGTC
GTCGTGCTGC CGCGCCATTG GCGTTTTCGC GTCACGTTGC CGTTCGACGC ACGCGGCAAA
CTGCCGGTCG CTGCCGTGGC GGCCGCGTTC GCACCGCGTA GCGAGGGCAT GGAAGTGCTG
GCCGAGGCGC GCAACGGCGA CACGCTGCAC TACGAGTTGC GCGTGCCGCC CACGCTCGTG
CATTTCGCCG GCCACTTTCC CGGTCTGCCG ATTCTGCCTG GCGTCGTCCA GGTCGATTGG
GCGATGCGTC TGGCCGCCGA GCACGTGCCG GGCGTGCGCG CGCTGGCGTC GATCGATCGT
CTGAAATTCA TGGCGCCGGT CTCGCCGGGC GCGGTGCTCA AGCTCACGCT CGCGCACGAC
GTGACGCGTC GGCGGGTGCA GTTTGCTTAT CGCATGAACG GCCGTGAATG CGCGTCCGGC
GTGATCGTCT ACGGGGAGGC CGCGTGA
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| Protein sequence | MIALHDLLSV ADDAAAMYAP VCRDGATLLD RTAFRARVAA LIALVQTRDA QRYALCIDDP
FDFACALFAL FACGKEPVIP ANSTPGYLAD LADAYEVVLT DADLPPAAFA ADAAPAHTSR
AAYPIDPQAP LTLYTSGSSG RPKPIRKTLA QFNAEVHTLE KQWGALVGDA TMLASVPHHH
IYGLLFRVLW PLAAGRAFDR AVSIEPLHLQ TQIEQCGAAV IVSTPAQLSR WPALPGFADL
TPAPRAFFSS GGPLGLEAAQ EYAAAYGAAP LEIYGSTETG GIAWRRQDQT DAWQAVSGIE
VRRDDDGALN VRSPHLDHAG WHRTDDKIAF DDEGRFRLQG RLDRVLKLDG KRVSLPELEA
RLALHPYVAQ AAIVPLEGAS RERVGAVVAL TEAGCAALRD EGRVALAKVL RRHLAEYFDV
VVLPRHWRFR VTLPFDARGK LPVAAVAAAF APRSEGMEVL AEARNGDTLH YELRVPPTLV
HFAGHFPGLP ILPGVVQVDW AMRLAAEHVP GVRALASIDR LKFMAPVSPG AVLKLTLAHD
VTRRRVQFAY RMNGRECASG VIVYGEAA
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