Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3058 |
Symbol | |
ID | 6283728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3450204 |
End bp | 3451799 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642622626 |
Product | Histidine ammonia-lyase |
Protein accession | YP_001896674 |
Protein GI | 187925032 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase [TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.244437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.468867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAC ATGATCTGAT CGATGTGCCG AATGCGGGCG CAAATGTGAA CGACGCGGCG GTGGTGATCG GCGGCCGCAA GCTGACGATC GAAGAGGTCG TCGCGATTGC GCAGCATCGC GCGCCGGTTG CCTTGAGCGA CGATCCGGCA TGGCGCGCGC GCATCCAGCG CGGCGCGGAT TTCCTGCGCC GGCATCTGGC CGCGGGCGCG ACGGTGTACG GCGTCAACAC CGGTTACGGG GACGCCTGTG TGGTCGACGT GCCGATGGAA CTGGTCGAAG CGTTGCCGCT GCAACTCACG CGCTATCACG GCTGTGGCAT GGGCCAATAT CTCGACGACG CGCAAACGCT CGCGGTGATC GCCGCGCGCC TCAACTCGCT CGCTTATGGT TTTTCCGGCG TGCGTCCCGT GTTGCTCGAA CGTCTGGCCG ATCTGGTCAA TCACCGTGTG CTGCCGCGCA TTCCGTCGGA AGGCTCGGTC GGCGCGAGCG GCGATCTCAC GCCGCTCTCG TATGTGGCCG CCGCGCTCGC AGGTGAACGC GACGTGATGT TCGAAGGACA GCTGCGCAAC GTGCGCGAAG TGTGGGCCGA ACTCGGCCAT GCGCCGCTCA CGCTCGCGCC GAAAGAAGGC CTCGCGCTGA TGAACGGCAC GGCCGTGATG ACGGGTCTCG CCTGTCTCGC GTTCGCGCGC GCCGATCATC TGACGCGGCT CACCGCGCGT CTGACCGCGC TGTGCACCGT CGCGCTCGAC GGCCGCGCCG CGCACTTCGA CGCGATGCTC TTCGAAGTGA AGCCGCATGC CGGCCAGGCC GAAGCCGCGG CATGGATTCG CGATGACTTG TCCGGACGCG ACGACACGCC GGGCCACCGT CTGCAGGACC GTTATTCGAT TCGCTGCGCG CCGCATGTGA TCGGCGTGGC GCGCGATGCA CTTTCGTGGG TGCGCCGCGA TGTCGAGAAC GAACTGAACA GCGCGAACGA CAACCCGCTG ATCGATCCCG ACAACGAACG CGTTCTGCAC GGCGGCAACT TCTACGGCGG CCATATCGCT TTCGCGATGG ACTCGTTGAA GGTCGCGGTC GCCAATCTCG CCGATCTGAT GGACCGGCAA CTCGCATTGC TGGTCGACGT GAATTTTAAC AACGGCTTGC CGCGCAATCT GTCGGGCGCC GCGCCCGCGC GCGCCGCGAT CAATCACGGT TTCAAGGCGG TGCAGATTTC GTCGTCCGCA TGGACTGCCG AGGCGTTGAA GAACACGATG CCCGCGAGCG TCTTTTCGCG CTCCACCGAG GCGCACAATC AGGACAAGGT CAGCATGGGC ACGATCGCCG CGCGCGACTG TCTGCGCGTG CTGGAACTGA CCGAACAGGT CGCCGCCGCG CATACGCTCG CGACGGTGCA AGCCGCGCGC CTGCGCTTGA AGATCGATAG CGCGACGCCG GTGCCGGCGC CGCTGCAGGC GTTCATGGAC AGCGTGGGCG CGCAGTCGCC GTTCGTCGAC GAAGACCGCG CGCTCGAACA CGAGCTGCGC GCGCTGACCG CGCGCATTGC CGCGTGCGAT CTTGCGAGCG ACTCTCGCGG AGGACCGAGC GCATGA
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Protein sequence | MAEHDLIDVP NAGANVNDAA VVIGGRKLTI EEVVAIAQHR APVALSDDPA WRARIQRGAD FLRRHLAAGA TVYGVNTGYG DACVVDVPME LVEALPLQLT RYHGCGMGQY LDDAQTLAVI AARLNSLAYG FSGVRPVLLE RLADLVNHRV LPRIPSEGSV GASGDLTPLS YVAAALAGER DVMFEGQLRN VREVWAELGH APLTLAPKEG LALMNGTAVM TGLACLAFAR ADHLTRLTAR LTALCTVALD GRAAHFDAML FEVKPHAGQA EAAAWIRDDL SGRDDTPGHR LQDRYSIRCA PHVIGVARDA LSWVRRDVEN ELNSANDNPL IDPDNERVLH GGNFYGGHIA FAMDSLKVAV ANLADLMDRQ LALLVDVNFN NGLPRNLSGA APARAAINHG FKAVQISSSA WTAEALKNTM PASVFSRSTE AHNQDKVSMG TIAARDCLRV LELTEQVAAA HTLATVQAAR LRLKIDSATP VPAPLQAFMD SVGAQSPFVD EDRALEHELR ALTARIAACD LASDSRGGPS A
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