| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3055 |
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| Symbol | |
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| ID | 6283725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3446691 |
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| End bp | 3449102 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622623 |
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| Product | putative drug efflux pump, RND superfamily |
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| Protein accession | YP_001896671 |
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| Protein GI | 187925029 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4258] Predicted exporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.100212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.322516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGC TGCAACAGCG ATCCGCGAAA CAGGCGTGGG GTATGCGCGC CGCGTGGCTG
CTGCTCGCGC TCGCTGCGGC GTTGTATTGC GGCTGGCGAT TCGCGGGACC GTCGCCGCTG
CAAACCAATC TGCTCGCGTT GTTGCCGGCG ACCGAGGCAG ATCCGGTCGC CGAAAAGGCG
GTCGATACAC TGGCGAGCGC GCTCGGCGAC CGCACCGTTT TTCTCGTTAC CAGCAACGAC
GACGCGCATG CGAAAGCCGC GGCGAAACAA CTCGGCGCTT CGTTGCAAAA GAGCGGGGCG
TTCGGTTCGG TGACGGCCGA GTTGCCGCCG TTCGATTTAT CGCAGATCGC GGCGTTGTAC
ATGCCATATC GTTTCGGCTT GCTGGCTCCT GCAGACCGGG CGGCGCTCGC GAGTGGCACG
GTCGGCACCA CCACGTTGCA CGACGCGCTC GCCCAGCGCA TCTACAGCCC GCTGCGCGGC
GGACTCACCA CGCCGCTCTC CGACGATCCG TTCGGCTGGC TCGAACACTG GCTCGGCGGC
CTGCCGCTTG CCACATCGAA TCTCGAACTC GAAGACAACA TGCTGGTCGC GCATCAAGGT
GCCGCCACCA GCGTACTAAT CGTCGCGACG CTGCCGGGCT CTGCGTACGA AACCAAAACG
CAGCACGCGG TACTCGCGTC GCTCGCTCAA GGCGAAAGCA CATTAAAACA ATCGTTCCCG
GATGTCTCCG TGGCGCGAAC CGGCGCCGTG TTCTACGCCG AGTCGGCACG CAGCGCGTCG
GAACATGAAG TGCATCTGAT CGGCCTCGCG TCGCTGTGCG GCATCGCGCT GCTGATGATG
TGGGTGTTCC GTTCGCCGCG TCTGTTGTTG CTCGGCTTCG TGTCCACCGC GCTCGGCATT
GTCTGCGCGC TGGCGGTGAC GATGCTGGTA TTCGGCAAGC TGCATCTGTT GACGCTCGTG
TTCGGCGCGA GCCTGATCGG CGAGGCCGTC GACTATTCGA TTCAGTACTT CGTCGTGTAT
CTCGGCGCGC AACGCGATTG GGACGCGCGG CGTGGCGCGC GCGCCGTGCG TCCCGCGTTG
AGCGTGGCGC TCGCGACGAG CCTGCTCGGC TACGCGATCC TCACGTGGGT GCCGTTTCCC
GCGCTCAAGC AGATCGCCTG CTTCGCGATT GCCGGTATTA CGACGGCGTT CGCGTCCGTG
CTCTGGCTGC TGCCCGCGTT GCTCACCCGC GCGCCCAAAC GCAGCCCCAA GCGCGTGTTT
GCAGGTGCGG CGCGCGTGCT GACGGTGTGG CATCGCACGA TCGGCGGCAG GCGGGCGTGG
TTCGTGGCGG CGCTGTTGCT GCTGCTGGCG ATTCCCGGCT GGCTGCGCCT GACCAGCGAC
GACGATATCC ATCTGCTGAT CCAGCGCGAT CCGGCGCTCG TCGCGCAGGA AGACAAAGTG
CGCGCGGCGG TCGGCGTGGA TAACAGTGCG CAGTTTTTCG TCGTGCGCGG CGAGACGCCC
GAGGTCGTGC TGCAACGCGC GGAAGCATTA GGCACGAAAC TGGATGCGTT GAACGGCACC
GCGGACAAGG TCGGCAGCTA TCAGTCGGTT GCGCAGTTCG TGCCGTCCGC GAAACAGCAG
AATGAAGATC GTGCGTTGCT TTCGCAGCAT GTTTTCAACG ACCGCGCCGC ATTGCGCGCC
ACGCTCCTGC AAGCCGGTTT CAAGGACGAA GTGGCCGACG CCTGGCTCGC CGCGTACGCG
AAACCACAAG CGCCGCTCAC GATCGATACG TGGCTCGCGA CGCCGTGGTC GCAACCGTAC
AAACACCTCT GGCTTGGCGA AGTCGATTCG TCGACGAAAG CCTATGCGGC GGTCGTCATC
CCGCAGGGCG TGACGCCGCA GAACGAACCC GCGTTGATCG CGGCCGCGCA GGGCTTGTCC
GGGGTGGTGT TCGTCGACAA GGCCGCCAGC GTGTCGAAAC TGTTCGGCGC GTATCGCGTG
GATAGCGGCT GGTGGCTCGG CGGCGCGCTT GCACTCGTGC TCGTTCTGTT GATGCTGAGA
TACAAAGTGC GTGGGGGCAT CGCCGTGACC TTGCCGGTGC TGCTCGCGGT GGGCGTCACG
CTCGCCGTAT TCGGCTATGC GCACGTACCG CTCAATCTGT TCAACTGGCT CGCGCTGATG
CTCGTGCTCG GCGTGGGCGC AAACTATGCC GTATTCCTGC GCGAAGGCTG CCTGCGCGCG
GACGCGGATC TCGGCGCGGT GTGGACGGGC GTGCTGCTGT CGGCGGCTAC GACGTTGTTG
TCGTTCGGCA TGCTCGGTAT GAGCGCGATG CCCGCGCTGG AGAGTTTCGG CGCGACGCTC
GCGCTCGGCA TTGCGGTTTC GGTGCTGCTC GCGCCGATCG GCATGCCATT GGAATCAAGG
AGGGCCGCAT GA
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| Protein sequence | MDMLQQRSAK QAWGMRAAWL LLALAAALYC GWRFAGPSPL QTNLLALLPA TEADPVAEKA
VDTLASALGD RTVFLVTSND DAHAKAAAKQ LGASLQKSGA FGSVTAELPP FDLSQIAALY
MPYRFGLLAP ADRAALASGT VGTTTLHDAL AQRIYSPLRG GLTTPLSDDP FGWLEHWLGG
LPLATSNLEL EDNMLVAHQG AATSVLIVAT LPGSAYETKT QHAVLASLAQ GESTLKQSFP
DVSVARTGAV FYAESARSAS EHEVHLIGLA SLCGIALLMM WVFRSPRLLL LGFVSTALGI
VCALAVTMLV FGKLHLLTLV FGASLIGEAV DYSIQYFVVY LGAQRDWDAR RGARAVRPAL
SVALATSLLG YAILTWVPFP ALKQIACFAI AGITTAFASV LWLLPALLTR APKRSPKRVF
AGAARVLTVW HRTIGGRRAW FVAALLLLLA IPGWLRLTSD DDIHLLIQRD PALVAQEDKV
RAAVGVDNSA QFFVVRGETP EVVLQRAEAL GTKLDALNGT ADKVGSYQSV AQFVPSAKQQ
NEDRALLSQH VFNDRAALRA TLLQAGFKDE VADAWLAAYA KPQAPLTIDT WLATPWSQPY
KHLWLGEVDS STKAYAAVVI PQGVTPQNEP ALIAAAQGLS GVVFVDKAAS VSKLFGAYRV
DSGWWLGGAL ALVLVLLMLR YKVRGGIAVT LPVLLAVGVT LAVFGYAHVP LNLFNWLALM
LVLGVGANYA VFLREGCLRA DADLGAVWTG VLLSAATTLL SFGMLGMSAM PALESFGATL
ALGIAVSVLL APIGMPLESR RAA
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