| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3052 |
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| Symbol | |
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| ID | 6283722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3444273 |
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| End bp | 3444998 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642622620 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001896668 |
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| Protein GI | 187925026 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01831] 3-oxoacyl-(acyl-carrier-protein) reductase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.427692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.158373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGC GTGTTCTCGT TACCGGCGCA AGCCGCGGCA TTGGCCGCGC GATTGCGTAC
AAGTTGGCCG CCGACGGCTT CGCGGTGTCC GTGCATTGCC GCACGGGGCG CAGCGAAGCC
GATGCGGTGG CGACGGGCAT CGCCGCGCAG GGCGGCACGG CGCGCGTGCT GCAATTCGAC
GTGCGCGAGC GCGCGGTGTG CCGCGAAGTG CTCGAAGCGG ACGTCGCGGC GCACGGGCCC
TACTACGGCA TCGTATGCAG CGCGGGCGTG ACGCGCGACG CCGCGTTCCC CGCGCTCACC
GAAGAAGATT GGGACATCGT GATCGAAACC GGTCTCGACT CGTTCTACAA CGTCGTCCAT
CCATTGACCA TGCCGATGGT GCGCGCCCGC AAGGGCGGCC GCATCGTCAC GATCGCTTCG
GTGTCCGGCG TGATGGGCAA TCGCGGCCAG GTCAACTACA GCGCGGCGAA GGCCGGCCTG
ATCGGCGCGA GCAAGGCGCT CGCCGTCGAA CTGGCGTCGC GCAACATCAC CGTCAATTGC
GTGGCGCCGG GGCTGATCGA GACCGGCATG CTCGATGAAA TGCCGCTCGA ACAGGCGCTC
AAGACGGTGC CGATGAACCG CGTCGGCCAG CCTGCCGAGG TGGCGTCCGT GGTCAGCTTC
CTGATGTCGG ATGCGGCCTC GTATGTCACG CGTCAGGTGA TCGGCGTCAA TGGCGGGATG
ATCTGA
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| Protein sequence | MSRRVLVTGA SRGIGRAIAY KLAADGFAVS VHCRTGRSEA DAVATGIAAQ GGTARVLQFD
VRERAVCREV LEADVAAHGP YYGIVCSAGV TRDAAFPALT EEDWDIVIET GLDSFYNVVH
PLTMPMVRAR KGGRIVTIAS VSGVMGNRGQ VNYSAAKAGL IGASKALAVE LASRNITVNC
VAPGLIETGM LDEMPLEQAL KTVPMNRVGQ PAEVASVVSF LMSDAASYVT RQVIGVNGGM
I
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