Gene Bphyt_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3038 
Symbol 
ID6281614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand+ 
Start bp3427660 
End bp3428340 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content64% 
IMG OID642622606 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001896654 
Protein GI187925012 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.340421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0334024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTT TGCAGACCGC CCGCCCTTCC CCGCCTGCCC GTGCGACCGC CGCCGCGAGT 
CTCGCCGAGC AGGCGTATGC GTTCGTCAAG CGCGAGATCA TCACCATGCG CCTGCGGCCG 
AGCGAGGTGC TCAACGAAGC GGAACTGATG GCGCTGACCG GCATCGGCAG GACGCCGGTT 
CATCAGGCGC TGCATCGGCT GGTGCACGAA GGCATGCTGA CCATCATGCC GCGCAAGGGC 
ATCATGGTCC GCCCGGTTTC GCTCGACGAC GTGCTGGCGA TCATCGACGT GCGTCTCGTC 
AACGAAAGCT ATTGCGTCGA ACTGGCCGCG CGCCACGCGC AACAGCACGA CTACGACGCG 
ATGCAGGCGC TGCTGGACCG CTCGGCCGTG TGCGTCGCCG CGCACGATAT CGAAGGCATG 
ATGGATATCG ACCGCGAGTT TCATCTGGCG ATTTCGGCCG CGTCGCGCAA CCCGGTGCTC 
GCCGACATTC TGCGCGGGCT GCACGAGCGC TCGCTGCGCT TCTGGTTCAT TTCGCTGTCC 
GAGCCGCACC ATCTGGAAGA CGTACACGAG GAACATCTCG AACTGTTTCG CCTGCTGCGC 
GAACGCGACG CCGAAGGCGC GCGCCAATCC GTGCAAAAAC ATATCGAAGC GTTCCGCGCC 
ACACTCTTCA ATCGCATCTG A
 
Protein sequence
MTLLQTARPS PPARATAAAS LAEQAYAFVK REIITMRLRP SEVLNEAELM ALTGIGRTPV 
HQALHRLVHE GMLTIMPRKG IMVRPVSLDD VLAIIDVRLV NESYCVELAA RHAQQHDYDA 
MQALLDRSAV CVAAHDIEGM MDIDREFHLA ISAASRNPVL ADILRGLHER SLRFWFISLS 
EPHHLEDVHE EHLELFRLLR ERDAEGARQS VQKHIEAFRA TLFNRI