Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3032 |
Symbol | |
ID | 6281608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3420615 |
End bp | 3421346 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642622600 |
Product | putative exported lipoprotein |
Protein accession | YP_001896648 |
Protein GI | 187925006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.338968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00314115 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGTATT CCTTATTAAT GCGGCGCGCC ATGCTGCTCG CAGCCTCGTG TGCGCTATTG CAGCAGGGCG GGTTTGTGCT GGCCGCGCAA GGCGACGAGG CCGCGCCGCT GGTTGGCACA CGGCCGGCCA TCAATACGCT GACGCCGCAG CCTGTCGCCG ACGCGCTGCG CAACGCTGCA TCTGCATCAG CCACGTCGCC CGCATCGCCC ACGGCGGGCG ATGCGCAAGG CAATGTCGCC GAACTGATGC AGATGATTCA CGACGCGAAG CTGAGCGAAC TGCGCACCAC GTATAACGGC AGTTACGGCG CCAGTCTGTT TTTCCATCCG CGGGAAATGA CGTACTACAT CGCGTTATTT CAGGACAAGC ATTTCTGGCG TGTGATCAAG ACCGAGGACA TGGCGCGCGC AGAAGCGATC TATGCGGGCT TTGGCCAGCA GACAGCGCAA CTCGCGGATG TCGAGATTCG CCGCACGCAG TTGCAGGCGC AGAAGGCGTA TATCGAAGAC GTGATTGCCA TGTCCGAAGA TCGCGCGAAA CGCCTGCAAG CCGATCTCGA CGTGGCTCGC ACACAAGAGG CCAAGGTCAA CGACTATCAG CGTCAAACCC AAGGTGAAGC GGTCACGCTG CATGCCGAGA AGGAAAGAGT GCAAGCGCAG TTGCGCCAGG TGCAGGGCGA AGTGATGCAG TTGCAGCGGC AAACTGAAAT GGGATTGCCG GTTCAGAAGT AA
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Protein sequence | MKYSLLMRRA MLLAASCALL QQGGFVLAAQ GDEAAPLVGT RPAINTLTPQ PVADALRNAA SASATSPASP TAGDAQGNVA ELMQMIHDAK LSELRTTYNG SYGASLFFHP REMTYYIALF QDKHFWRVIK TEDMARAEAI YAGFGQQTAQ LADVEIRRTQ LQAQKAYIED VIAMSEDRAK RLQADLDVAR TQEAKVNDYQ RQTQGEAVTL HAEKERVQAQ LRQVQGEVMQ LQRQTEMGLP VQK
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