| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3029 |
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| Symbol | |
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| ID | 6282086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3416971 |
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| End bp | 3418272 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622597 |
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| Product | General substrate transporter |
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| Protein accession | YP_001896645 |
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| Protein GI | 187925003 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.07969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0112235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACAG CGACACACGC TACTTCCACA TCGCAAGAAT CCAAAGTCAA GACAGTCTTC
CGCGTTGTCA GCGGCAACTT CCTTGAGATG TACGACTTCA TGGTTTATGG CTATTACGCT
TCGGCGATCG CCAAGACCTA CTTTCCAAGC GGCAACGAAT TCGCCTCGTT GATGCTGTCA
CTGTCGGTAT TCGGCGCGGG CTTCCTGATG CGGCCGCTCG GCGCGATCGT CCTCGGCGCG
TACATCGATC ATCACGGCCG GCGCAAAGGC CTGATCCTCA CGCTCGGTTT GATGGCGCTC
GGCACGCTCA CGGTCGCATC GATTCCAGGC TACGCGACGA TCGGCTTGCT CGCGCCGGTG
CTCGTTCTGG GTGGCCGGCT GTTGCAAGGT TTCTCCGCCG GGGTCGAACT GGGCGGCGTG
TCGGTGTATC TGTCGGAGAT CGCCACCAAG GGCAACAAGG GCTTCTACTG CGCGTGGCAG
TCGGGCAGCC AGCAGGTCGC CGTGGTATTC GCCGCGCTGA TCGGCGTGTT CCTGAACAAG
CTGTTGCCGG CTGACCAGAT GACCGCCTGG GGCTGGCGCG TGCCGTTCCT GATCGGCTGC
CTGATCGTGC CGTTCCTGTT CCTGATCCGC CGTTCGTTGC AGGAGACCGA AGAGTTCAAG
GCACGCAAGC ACCATCCGAA GATGGGCGAG ATCATGAAGA CGATGGCCGC GAACTGGGGC
ATCGTGCTCG GCGGCATGGG CATGGTGATC ATGACCACCG TGTCGTTCTA CATGATCACG
GCGTACACGC CGACCTTCGG CAAGGAAGTG CTGAAGCTGT CGTCGATCGA TACGTTGATC
GTTACGGTCT GCATCGGTCT GTCGAATCTG GTCTGGCTGC CGCTCGCGGG GGCGTTGTCC
GACCGTATTG GCCGGCGTCC GGTGTTGCTG GCGTTCACGA TCCTGACCAT CCTCACCGCG
TATCCGGCGC TGCAGTGGCT GGTGGCGGAC CCGTCGTTCG CGCGTCTGCT GGAAGTCGAA
CTGTGGCTGT CGTTCCTGTA CGGCAGCTAT AACGGCGGGA TGGTCGTGGC GCTGACCGAA
GTCATGCCGG TCGAGGTGCG GACCGCTGGT TTCTCGCTTG CCTATAGCCT CGCCACGACG
ATCGGCGGCT TCACGCCGGC AATCTCGACG TTGCTGATTC ACTCGACCGG CAACAAGGCG
GCACCGGGTC TGTTCCTGGG TGCGGCGGCG ATTTGCGGGT TGATCGCGAC GTTGGTGCTG
TATCGCACGC CGGAATCGCG CAATCAATAT CGAACGGCCT GA
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| Protein sequence | MSTATHATST SQESKVKTVF RVVSGNFLEM YDFMVYGYYA SAIAKTYFPS GNEFASLMLS
LSVFGAGFLM RPLGAIVLGA YIDHHGRRKG LILTLGLMAL GTLTVASIPG YATIGLLAPV
LVLGGRLLQG FSAGVELGGV SVYLSEIATK GNKGFYCAWQ SGSQQVAVVF AALIGVFLNK
LLPADQMTAW GWRVPFLIGC LIVPFLFLIR RSLQETEEFK ARKHHPKMGE IMKTMAANWG
IVLGGMGMVI MTTVSFYMIT AYTPTFGKEV LKLSSIDTLI VTVCIGLSNL VWLPLAGALS
DRIGRRPVLL AFTILTILTA YPALQWLVAD PSFARLLEVE LWLSFLYGSY NGGMVVALTE
VMPVEVRTAG FSLAYSLATT IGGFTPAIST LLIHSTGNKA APGLFLGAAA ICGLIATLVL
YRTPESRNQY RTA
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